Calothrix sp. NIES-2098: NIES2098_21930
Help
Entry
NIES2098_21930 CDS
T08374
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
caln
Calothrix sp. NIES-2098
Pathway
caln03030
DNA replication
caln03430
Mismatch repair
caln03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
caln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NIES2098_21930
03430 Mismatch repair
NIES2098_21930
03440 Homologous recombination
NIES2098_21930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caln03032
]
NIES2098_21930
03400 DNA repair and recombination proteins [BR:
caln03400
]
NIES2098_21930
Enzymes [BR:
caln01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NIES2098_21930
DNA replication proteins [BR:
caln03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NIES2098_21930
DNA repair and recombination proteins [BR:
caln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NIES2098_21930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
Intein_splicing
Motif
Other DBs
NCBI-ProteinID:
BAY09032
LinkDB
All DBs
Position
complement(2625703..2628333)
Genome browser
AA seq
876 aa
AA seq
DB search
MSFVPLHIHSDYSLLDGASQLPELVDRAIALGMKAIALTDHGVMYGAVELIKICRSKNIK
PILGNEMYIINGDIEKQERRPRYHQVVLAKNTKGYKNLVKLTTISHLKGVQGKGIFSRPC
INKELLKEYHEGLIVTSACLGGEVPQAILSGRPDAARKVAQWYKDVFGDDYYLEIQDHGS
QEDRIVNVEIIKIAKELGIKVVATNDSHFISCYDVEAHDALLCIQTGKLIIEENRMRYSG
TEYLKSAEEMQLLFRDHLPEDVIAEAVATTEEVADKVEPYQIMGEPRIPNYPIPSGHTAD
TYVEEVAWQGLLERLNRKSRNEVDRVYKERLEYELKMLQQMGFSTYFLVVWDYIKFARDN
NIPVGPGRGSAAGSLVAYAMRITNIDPVHHGLLFERFLNPERKSMPDIDTDFCIEKRDKV
IDYVTEKYGADRVAQIITFNRLTSKSVLKDVARVLNIPYGEADKMAKLIPVVRGKPTKLK
VMVSDDTPAPEFKEKYDNEPHVRHWIDMAMRIEGTNKTFGVHAAGVVISADPLDEIVPLQ
RNNDGSVITQYFMEDLESMGLLKMDFLGLRNLTLIQKTLDLIEQTNGYRVDPDEITGQER
KAQRILAKGEHSTLPKDVQKAYALLEAGELEGVFQLESSGMKQIVRDLKPSNIEDISSIL
ALYRPGPLDAGLIPKFINRKHGRENIDYETAILEPILNETYGIMVYQEQIMKIAQDMAGY
SLGQADLLRRAMGKKKVSEMQKQQEKFIDGATKNGVKKQVAEKLFDDMLKFAEYCLSYDT
EVLTVEYGLIPIGEIVEKQLECSVYSVDENGNVYTQPVAQWHNRGQQEVFEYCLEDGSII
RATKDHKFMTTDGQMLPIDEIFERGLDLLQVPRLPR
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttgtgcctttacatattcacagtgactacagcttgctcgatggggctagtcag
ctgccagagttggtggatcgggcgatcgccttggggatgaaagcgatcgcgcttacggat
cacggtgtgatgtacggtgcggtggaactgatcaaaatctgccgcagtaagaacattaag
ccaattcttggcaatgaaatgtatataattaatggcgatatcgaaaagcaagaacgtcgt
cctcgttatcatcaagttgttttagctaaaaatactaaaggttataaaaatttagtcaaa
ttaactacaatttctcatcttaaaggtgtacagggaaaaggtattttttctcgtccttgt
attaacaaagaattattaaaagaatatcatgaaggtttaattgtcaccagtgcttgtttg
ggtggagaagttccccaagcaattcttagcggcaggccagatgcagctcggaaagttgct
caatggtataaagatgtatttggtgatgactattatttagaaattcaagaccacggttct
caagaagaccgaattgttaacgtcgaaattattaaaattgccaaagaattaggtattaaa
gttgttgctactaatgattctcattttatttcttgttatgacgtagaagcccacgacgct
ttgctgtgcattcaaacaggcaagctcattattgaagaaaatcggatgcgatatagcggc
acagaatatctcaaatctgccgaagagatgcagctgctatttcgcgatcatttaccagaa
gatgtcattgccgaagctgtagcaactactgaagaagttgccgataaagtcgagccttac
cagataatgggtgaaccgagaattcccaattaccccataccttctggacatacagccgat
acctatgtagaagaagttgcttggcaaggactgttagaaagattaaatcgcaaatcccgc
aatgaagtcgatcgcgtatacaaagaaaggctggaatatgagttaaaaatgctccagcaa
atgggtttctccacatactttctcgttgtgtgggattacatcaaatttgccagagataat
aatattcctgtggggccgggacggggttctgcggcgggttctttagtagcatatgcgatg
cgaattactaacatcgaccccgtgcatcatggactgctatttgagcgttttttgaatcca
gaacggaaatccatgcctgatattgatacggatttctgcattgaaaaacgcgacaaagtg
attgattatgtcacagaaaaatatggtgccgatcgagttgcgcaaattatcacctttaac
cgtctgacttctaaatcagtattaaaagatgttgccagagtgttaaatattccctatggg
gaagcagacaaaatggccaaattaattccggtggtgcgaggtaaaccaactaagttaaaa
gtgatggtttcagatgacaccccagcaccagagtttaaagaaaagtatgataatgaacct
catgttcgccattggattgacatggcgatgcgcattgaaggaactaacaaaacctttggc
gttcatgcagcaggtgtggtaatttctgccgatcctcttgatgaaattgtaccgttacag
agaaataacgacggttccgtgattacccaatatttcatggaagatttagaatcaatggga
ttgttaaagatggactttctcggtctgcgtaacttaactttgattcaaaagactctcgat
ttaattgaacaaactaacggttatcgcgtcgatcctgatgaaattacaggacaagaaaga
aaagcacagaggatattagcgaaaggcgaacatagtactctaccaaaagatgtgcaaaaa
gcttacgcattattagaagctggagagttagaaggagtatttcagttagaatcttcgggg
atgaaacagatagtgcgagatttgaagccatctaatattgaagatatttcttcaattttg
gcactttatcgaccggggcctttagatgcgggattaattcctaagtttattaatcgcaaa
cacggtagagaaaatattgactatgaaactgcgattttagaaccgatattaaatgaaacc
tatggaatcatggtctatcaagagcagattatgaaaattgctcaggatatggctggatat
tcgctaggacaagccgacttgctgcgtcgggcgatgggtaaaaagaaagtttcggaaatg
cagaagcagcaagaaaagtttattgatggtgcgactaaaaacggcgtaaaaaagcaagta
gctgagaagttatttgacgatatgttgaaattcgccgaatattgcttaagctatgacacg
gaagttttgacagtagaatatgggttaattccgattggtgaaattgttgaaaaacaattg
gaatgcagcgtttatagtgttgatgaaaatggcaacgtttatactcaacctgtagcacag
tggcataatcgcggtcaacaggaagtatttgagtattgtttagaagatggttcgattatt
cgggcgacaaaagaccataaatttatgactacggacgggcaaatgttaccgattgatgaa
atctttgaacggggattggatttgttgcaagttccacgattaccaagataa
DBGET
integrated database retrieval system
