Calothrix sp. NIES-2098: NIES2098_28680
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Entry
NIES2098_28680 CDS
T08374
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
caln
Calothrix sp. NIES-2098
Pathway
caln00220
Arginine biosynthesis
caln00240
Pyrimidine metabolism
caln00250
Alanine, aspartate and glutamate metabolism
caln01100
Metabolic pathways
caln01110
Biosynthesis of secondary metabolites
caln01240
Biosynthesis of cofactors
Module
caln_M00978
Ornithine-ammonia cycle
Brite
KEGG Orthology (KO) [BR:
caln00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
NIES2098_28680 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
NIES2098_28680 (carB)
00220 Arginine biosynthesis
NIES2098_28680 (carB)
Enzymes [BR:
caln01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
NIES2098_28680 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_4
ATP-grasp_2
ATPgrasp_Ter
ATP-grasp_5
RimK
CoA_binding_2
Epimerase
UvrA_DNA-bind
BTAD
Motif
Other DBs
NCBI-ProteinID:
BAY09705
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All DBs
Position
3457658..3460909
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AA seq
1083 aa
AA seq
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MPRRQDLRKILLLGSGPIVIGQACEFDYSGTQACKALREEGYEVVLVNSNPATIMTDPET
ADRTYIEPLTPELVAKVIAKERPDALLPTMGGQTALNIAVALAKNGVLEQYGVELIGAKL
PAIEKAEDRKLFNDAMAKIGVNVCPSGTASSLEEAKAIARRIGTYPLIIRPAFTMGGTGG
GIAYNQEEFEEMAQVGIDASPVSQILIDQSLLGWKEYELEVMRDLADNVVIICSIENFDP
MGIHTGDSITVAPAQTLTDKEYQRLRDMAIKIIREIGVETGGSNIQFAVNPVTGDVVVIE
MNPRVSRSSALASKATGFPIAKMAAKLAVGYTLDEIKNDITKKTPASFEPTIDYVVTKVP
RFAFEKFPGSEPVLTTQMKSVGEAMSIGRTFNESFQKALRSLETGRAGWGCDKAEKLPSG
EQIRAQLRTPNPERIFAVRHAMQLGLTNEEIYELTGIDPWFLDKLQQLLEVEKFLKRTPL
QQLTKEQIYAVKREGFSDRQIAFATKTSEDEVRAYRKQLGVIPVYKTVDTCAAEFEAFTP
YYYSTYEDETEVLPTTKPKVMILGGGPNRIGQGIEFDYCCCHASYALKGAGYETIMVNSN
PETVSTDYDTSDRLYFEPLTKEDVLNIIEAENPVGIIVQFGGQTPLKLAVPLQQALSSIP
STNIWGTSPDSIDMAENRERFEKILNQLNIAQPPNGIARSYEDALIVAKRIGYPVVVRPS
YVLGGRAMEIVYSDAELERYMTFAVQVEPDHPILIDKFLENAIEVDVDAIADHTGRVVIG
GIMEHIEQAGIHSGDSACTLPSISLPPAVLNQIRTWTIQLAQALSVVGLMNIQFAVVGAS
SYSPQIYILEANPRASRTVPFVSKATGVQLAKLASLIMSGKTLEELGFTQEVIPSHIAVK
EAVLPFNKFPGTDTILGPEMRSTGEVMGIDSDFGRAFAKAEIGAGERLPLSGTVFVSMSD
RDKAPAVNVVKEFMDLGFTVMATFGTRKVLHEHGLDVELVLKLHEGRPHVLDAIKNQKIQ
LIINTPSGEEAQTDARLIRRTALAYKIPIITTIAGAKATVAAIRSLQTTTLDVKVIQDYC
MLN
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgccgtcaagacctccggaagatactgctgttaggctcaggcccgattgtaatt
ggacaagcctgtgagtttgactactctggcactcaagcctgtaaagctttacgggaagaa
ggctatgaagtggtgctggtgaactctaatccagctactatcatgaccgacccagagaca
gccgatcgcacttatattgagccgctaacaccggaattggtcgccaaagtcatcgccaaa
gagcgtcctgatgctttactaccaacaatggggggacaaaccgccctgaatattgccgtt
gctctagcgaaaaatggtgttttagagcagtatggtgttgagttgattggcgctaaactt
ccagctattgaaaaagctgaagacagaaaactcttcaatgacgccatggccaagattggg
gtgaatgtttgccctagtggtacagcctcatctttagaagaagcaaaagcgatcgcccgc
cgcattggtacttatcccttaattattcgtcctgcttttacaatgggtggtacgggcggc
ggtattgcctacaaccaagaagaatttgaagaaatggcacaggtgggtattgatgctagc
cccgtttcgcaaattctcatcgaccaatccctactcggctggaaagagtacgaattagaa
gtcatgcgcgacctagcagataacgtggtaattatctgctccatcgagaacttcgacccg
atgggcatccacaccggagactcaattaccgttgctcccgcccaaaccctcaccgataag
gaatatcaacggctgcgggatatggcgattaaaatcatccgcgagattggtgtcgaaact
ggcggttccaatattcagtttgccgtcaacccagtcacgggggatgtggtggtgattgaa
atgaacccccgtgtatctcgcagttccgccttagcttctaaagctactggtttccccatc
gccaagatggcggctaagttagctgttggctataccttagatgaaattaaaaacgacatt
accaagaaaactccggcatcttttgaaccgacaattgactacgtagttaccaaagttccc
cgcttcgcctttgaaaagttccccggttccgaaccagtgttgacaacgcagatgaaatca
gtcggggaagcgatgtcaattggcagaacattcaacgaatccttccagaaagcactgcgt
tctctagaaactggacgtgcaggttggggttgcgacaaagccgagaaattgcctagtggc
gaacaaattcgcgcccagttacggacgcccaatccagagcgcattttcgccgtgcgtcat
gcgatgcaattggggctaactaatgaagaaatctacgaacttacaggtattgacccctgg
ttcctcgataaattgcaacaactgctagaagtcgagaaattcctcaaacgcactccgttg
caacaattgacaaaagagcaaatatatgcggtaaagcgtgagggatttagcgatcgccaa
attgcctttgctactaaaaccagcgaagatgaagtgcgggcataccgcaaacagttagga
gtcatccctgtttacaaaactgtggatacttgcgccgcagagtttgaggcgtttacacct
tactactattccacctacgaagacgaaacagaggttttacccacaaccaaaccaaaagtg
atgattttgggtggtggccccaaccgcatcggacaagggattgagttcgattattgctgt
tgtcatgcttcctatgcattaaaaggagcaggctatgagacgattatggtcaactctaac
ccagagacggtttctacagattatgacaccagcgatcgcctctactttgagccattaacc
aaagaagacgtcctcaatatcatcgaagcggaaaatccagtcggcattattgtacaattc
ggcggacaaacacctctaaagttagcagtacctttacagcaagcccttagtagcataccc
agcacgaacatttggggcacatctccagattccattgatatggcagaaaaccgggaaagg
tttgaaaagatccttaaccagttgaatattgcgcaaccacctaatggaattgctcgcagt
tacgaagacgcgctgattgtcgccaaacgcattggctatccagtggtggtacgtcctagc
tatgtattggggggaagggcgatggaaatcgtctattccgatgcagaattggaacgctac
atgacttttgcggtacaggtagaaccagatcatccgattttgattgataagtttttggaa
aatgcaatcgaagtcgatgtggatgcgatcgccgaccacaccgggcgggtagtaattggc
ggtattatggaacacatcgaacaagccgggattcactctggtgactcagcttgtacttta
ccttcgatttctctaccgccagcagtactcaatcaaattcgcacttggacgatacagcta
gcacaggcgctttcagtagttgggctgatgaatattcagtttgctgtggttggtgctagt
agctattctccgcaaatttacatcttagaagccaacccccgcgcctctcggactgtcccc
ttcgtgtctaaagccacaggcgtgcaactggcaaaactcgcatccttgattatgtcaggt
aaaaccttagaggagctaggcttcactcaggaagtcatcccttcccacattgccgttaaa
gaagcagtattgccatttaataaattccccggtacagataccatcctggggccagaaatg
cgctccactggcgaagttatgggaattgacagcgattttggccgcgcctttgccaaggca
gaaatcggtgctggggaacgcttacctttgtcgggaaccgtttttgtatcgatgagcgat
cgcgataaagcccctgcggtgaacgttgtcaaagaatttatggatttaggctttacagtg
atggcgacatttggcactcgtaaagttcttcatgaacacggcttagatgtagagttagta
ctaaaactccatgaaggtcgtcctcacgtcctagacgccatcaaaaaccagaaaatccaa
ctcattatcaacaccccttcgggagaagaagcccagactgatgctagattaattcggcgc
acagccttggcttataaaatccccatcatcaccacgatcgccggagcaaaagccactgtg
gctgccattcgttctctgcaaactactactttggacgtaaaagttatccaagattactgc
atgttgaattag
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