Calothrix sp. NIES-2098: NIES2098_28780
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Entry
NIES2098_28780 CDS
T08374
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
caln
Calothrix sp. NIES-2098
Brite
KEGG Orthology (KO) [BR:
caln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caln03400
]
NIES2098_28780
DNA repair and recombination proteins [BR:
caln03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NIES2098_28780
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Ortholog
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GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
AAA_16
AAA_22
nSTAND3
Lon_C
NTPase_1
ABC_tran
zinc_ribbon_6
AAA_14
GvpD_P-loop
NACHT
MCM
DZR
DUF7125
ATP-synt_ab
AAA_24
ATPase_2
SLFN-g3_helicase
AAA_29
zf-RING_10
AAA_5
DUF7129
Motif
Other DBs
NCBI-ProteinID:
BAY09715
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Position
3469306..3470844
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AA seq
512 aa
AA seq
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MAKPKTFYICNDCGAESSQWFGKCPACGTYNSLEEQISIQSSVDIPSRGGVSGWQSASTN
GKSHNKPAKPRASLTFDQISDRQIARWESGYGELDRVLGGGVVPGSMVLIGGDPGIGKST
LLLQVSNQLAQRYRILYVTGEESGQQVKLRASRLGVAKGVNVVGDENQPVANTSVAEATT
SPVSPEGIGADLYVLPETDLEEILREIDSLKPNLAVIDSIQTVFFPALTSAPGSVAQVRE
CTAALMKVAKHEDITMLIVGHVTKEGAIAGPKVLEHLVDTVLYFEGDRFASHRLLRTVKN
RFGATHEIGIFEMVSHGLREVPNPSELFLGNRDDPAPGTAIVVACEGTRPIVVELQALVS
PTSYPSPRRAATGIDYNRLVQILAVLEKRVGIPMSKLDSYVASAGGLNVEEPAVDLGIAI
AIVASFRDRIVDPGTVLIGEVGLGGQVRSVSQMELRLKEAAKLGFKRAIVPKGQKFPDLN
IEILPVSKVIDAIIAAIPHQELTEDDLIPDED
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcccaaaactttttacatttgtaacgattgtggagcagaatcttcccaatgg
tttggtaagtgtccagcttgcggcacatataactccttagaagagcagatttctatccaa
tcatcagtggatatacccagtcgtgggggggtaagtggttggcaatcagcgtcaactaat
ggcaagtctcataataaaccagctaaaccacgagcttctctaacattcgaccaaattagc
gatcgccaaattgcccgttgggaatctggttatggagaattagatcgggtgttgggtggt
ggagttgttcccggttcaatggtgctgattggtggcgatccgggaattgggaaatcaact
ttgctgcttcaagtatcgaatcaattagcgcagagataccgcatcctttatgttacaggg
gaagaatcaggtcaacaggtaaagttaagagcttcccgtttgggtgtagcaaaaggtgtt
aatgtcgtaggcgatgaaaatcagcctgtagcaaatacatctgtagcagaagcaacaaca
tctcctgtcagtcctgaggggataggtgcagatttatatgtattaccggaaacagactta
gaagaaattctccgggaaattgactctctcaagccaaacttggcagtaattgatagtatc
caaacggtgttctttccagcactgacatctgcaccgggttccgtagctcaagtacgggaa
tgtaccgccgcactgatgaaagtggcaaagcatgaagacatcacaatgttaattgtggga
cacgtaactaaagaaggtgcgatcgcggggccgaaagttttagaacacttagttgataca
gtactgtattttgaaggcgatcgctttgcctcccatcggttattacggacagtgaaaaat
cgctttggtgcaactcacgaaatcggtatttttgagatggtatctcacggattgcgtgaa
gttcctaacccctcagagctatttttaggtaatcgtgacgatcccgcccctggtactgct
attgttgtggcctgtgaaggaactcgccccatcgttgtcgaattgcaagctttggtaagc
cctactagctacccctcaccccgacgcgccgccacgggtatagactataaccgcctcgtg
caaatcctcgcagtcttagaaaaaagggtaggaattcctatgtccaaactcgattcctac
gtcgcttcggcgggtggtttgaatgtggaagaaccagcagtagatttaggaatagcgatc
gctattgttgccagtttccgcgatcgcatcgtcgatccaggtacagttttgattggtgaa
gtcgggttaggcggacaagtgcgatccgtttctcagatggaactgcgtttgaaagaagca
gccaaactcggatttaaaagagcgatcgttcccaaaggtcaaaaatttcccgaccttaat
atcgagattttaccagtttccaaagtaatagatgcaattattgccgctattccccatcaa
gaactcacagaagacgatttaatacctgatgaagactaa
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