Calothrix sp. NIES-2098: NIES2098_28870
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Entry
NIES2098_28870 CDS
T08374
Name
(GenBank) translation initiation factor IF-2
KO
K02519
translation initiation factor IF-2
Organism
caln
Calothrix sp. NIES-2098
Brite
KEGG Orthology (KO) [BR:
caln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
caln03012
]
NIES2098_28870
03029 Mitochondrial biogenesis [BR:
caln03029
]
NIES2098_28870
Translation factors [BR:
caln03012
]
Eukaryotic type
Initiation factors
MTIFs
NIES2098_28870
Prokaryotic type
NIES2098_28870
Mitochondrial biogenesis [BR:
caln03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
NIES2098_28870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IF-2
GTP_EFTU
EF-G_D2
IF2_N
MMR_HSR1
GTP_EFTU_D2
Ras
Arf
RsgA_GTPase
Roc
FeoB_N
MMR_HSR1_Xtn
HTH_Mga
PduV-EutP
SRPRB
Motif
Other DBs
NCBI-ProteinID:
BAY09724
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All DBs
Position
3479203..3482331
Genome browser
AA seq
1042 aa
AA seq
DB search
MNNGKVRIYELSKELNLDNKELLAICDQLNIAVKSHSSTISDSEAERIRLAAEKHAATNG
THKKEIITSHQSNTPQAGSRNRPALPHKQQILEIRKPKILRNTTPNASEASVATNTQTAS
SEVNPLSPPKPFATPVSPMQPTAPTRPVPRNLSETPQQPAVTDAAPTPNPQPKEKVVAEK
PEKTVPSRPRPEKPQKPQLAAPPARPVAEAPSASEQIGQADKPILKRERQRRAEDEREQV
KPRSGKPTTDQSAPQSLPQKQARPTPGPVKPEHRANRPPSAPGSSGDSQRPSRPVRPSEA
VAAMPIATPPRPMQGGQGKVATVVDEVVPSDILDLKRPTPPRPAKGGKKWQEEEIIDEIK
EKPGKAGVKGKRIKPVLDDDFEEEDLLDEEGLEIPATVQVSLSIARPPKPKAARPAQQPT
VAIASPTAKGKKSASNRDQNRRQEVEVKRDRPEKVVVTGPLTVQELADLLVVADTEIVKI
LFMKGMAVSITQNLDIPTITLVAKELEVEVETAEPEAEARKVTEMLDVADMENLHRRPPV
VTIMGHVDHGKTTLLDSIRKTKVAAGEAGGITQHIGAYHVDIEHEGQPHQIVFLDTPGHE
AFTAMRARGARVTDIAVLVVAADDGVRPQTIEAISHAQAAGVPIVVAINKIDKEGAQPER
VKQELTNYGLTAEDWGGETIMVPVSAIKGENLDTLLEMILLVAEVAELSANPDRVAKGTV
IEAHLDKAKGAVATLLIQNGTLHVGDMLVAGSAFGKVRAMVDDRGRRVDVASPSFAVEVL
GLSDVPAAGDEFEVFENEKEARSLASDRADKQRQSRLLQGRVTLTTLSAQAQEGELKELN
LILKADVQGSVEAIVGSLRQIPQNEVQIRMLLATAGEITETDIDLAAASNAVIIGFNTTY
ASGARQAADEAGVDVREYNIIYKLLEDIQGALEGLLEPELVEEPLGQTEVRAVFPVGRGA
VAGCYVQSGKLVRNCKLRVRRGGKVIYEGVLDSLKRMKEDAREVNAGYECGIGIDKFHDW
AEGDIIEAYQMVTKRRTLTLTK
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacggcaaagttagaatctatgaattatcaaaggaattgaatttggataacaaa
gagctattagcaatatgcgaccagctcaacatcgcggtcaaaagccatagcagtacaatt
tcagattcggaggcagaacgcatccgtttagctgcggaaaaacacgcagctaccaatgga
acccataaaaaagaaatcataaccagtcatcaatcaaacacgccacaagctggctcaaga
aaccgacctgccctacctcacaaacagcaaattttggaaattcgtaaacccaaaatattg
agaaatactaccccaaacgcctcagaggcgtcagttgctactaatacccaaactgcttcg
tctgaagttaatcctctctcacctccaaagcccttcgctacaccagtctcacccatgcag
ccgacggcaccaactcgaccagtaccccggaatctatctgagaccccacagcaaccagct
gttacagacgcggctccaacgcctaatccacagccaaaagaaaaagtagttgcggaaaaa
ccggaaaaaacagttccatccagaccgagacccgaaaaaccgcaaaaacctcaactagct
gctccacctgcaagaccggtagccgaagcaccgtcagcatctgagcagatcggtcaggca
gataagccgatccttaagcgcgaacgccaacggcgtgcagaagacgaacgcgaacaagtt
aagcccagatctggcaagccaaccacagaccaatctgcaccacagtctttaccgcaaaaa
caggctcgtcctactccaggtccggtcaaaccagaacacagggcaaatcgacctccttct
gcaccaggttcatcaggagacagccaacggccaagcagaccagtacgtccaagtgaagct
gtagcggctatgccgattgctacgccaccaagaccgatgcaaggcggacaggggaaagta
gcgacagttgtcgatgaggtagtacctagcgacattctcgacttaaaacgccccacgcca
ccacgtccagctaaaggtggtaaaaagtggcaagaagaagaaattattgatgaaatcaaa
gaaaaacccggcaaggcaggggttaaaggcaagcggatcaagccagtccttgatgatgat
tttgaagaagaagatttactggatgaagaaggtttggaaataccagccaccgtccaggtc
agtctttccattgcccgacctcccaaacccaaggcagctcgacctgcacagcaaccaact
gtagctattgctagcccaacagctaaagggaaaaaatcagcttccaaccgcgaccaaaat
cgtcgccaagaagtagaagtcaagcgggatcgcccagaaaaagtggtagtgacaggcccc
ctaacagtgcaagaattggctgaccttttggttgtggctgatacagagattgtgaaaatc
ctgttcatgaaaggcatggcagtgagtatcacgcaaaacctggatattcccacaattact
ttggtagcaaaagagctagaagtagaagtggaaactgccgaaccagaagcagaagcccgt
aaagtcacagaaatgctggatgtggcagacatggaaaatctccatcgtcgtccgccagta
gtgacaattatgggtcacgtagaccacggtaaaacaactctgctggattcgattcgcaaa
accaaagtggcagcaggcgaagctggtggtattacgcagcacattggtgcataccatgtc
gatatcgaacatgaaggacagccacatcaaatagtattccttgatacccccggtcacgaa
gccttcacagcgatgcgggcacggggagcaagagtcacagacattgccgttttggtagta
gctgctgatgatggtgttcgtccgcaaaccatcgaagcgattagccacgctcaggcggct
ggcgtaccaattgtcgttgccattaacaagattgacaaagaaggggcacaaccagagcgt
gtcaagcaagaacttaccaactatggtctaaccgctgaagactggggtggtgaaacaatt
atggttcccgtgagtgcgatcaagggtgaaaacctggatacactcctagaaatgattctc
ctagtagcagaagtagcagaactatctgctaacccagaccgtgttgctaaaggaactgtg
attgaagctcatttggataaggctaagggagcagttgctaccttgctaattcaaaatggc
accctgcatgttggagatatgctggtagcaggctcggcatttggtaaagtccgggcaatg
gtggatgatagaggcagaagggtagacgttgctagtccctcctttgcggtggaagtattg
gggttaagcgatgtaccagccgcaggcgatgagttcgaggtcttcgagaatgaaaaagaa
gcacgctctctagctagcgatcgcgctgataaacaacgtcaatcccgcctcttacaagga
cgtgttaccctcacaaccctgtcggctcaagcacaagaaggcgagttgaaagaactcaac
ttgatcctcaaagcagacgtccaaggttcagtagaagcgattgtgggatcgctaagacaa
atcccgcaaaacgaagtccaaattcggatgttgttagctactgctggagaaatcaccgag
acggatatcgacttagccgcagctagtaacgccgtaattattggcttcaacaccacctac
gccagtggagccagacaagcagctgatgaagcaggtgtagatgtgcgggaatacaacatc
atctacaaactcctcgaagatattcaaggagccttggaaggtctactagaaccagaattg
gtagaagaacccttgggacaaaccgaagttcgtgccgtgttcccagtcggtcggggtgcg
gttgctggttgttatgtacaatctggcaaactagtccgcaactgcaaactgcgggtacgt
cgtggcggtaaggtgatctacgaaggcgttctcgattccctcaaacggatgaaggaagat
gcccgcgaagtcaatgccggttatgaatgcggtattggcattgataaattccatgattgg
gctgaaggtgacatcatcgaagcttaccaaatggtaactaagcgtcgcaccttgacactg
acaaagtag
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