Calothrix sp. NIES-2098: NIES2098_29990
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Entry
NIES2098_29990 CDS
T08374
Name
(GenBank) permease YjgP/YjgQ
KO
K11720
lipopolysaccharide export system permease protein
Organism
caln
Calothrix sp. NIES-2098
Pathway
caln02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
caln00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NIES2098_29990
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
caln02000
]
NIES2098_29990
Transporters [BR:
caln02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
NIES2098_29990
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
Motif
Other DBs
NCBI-ProteinID:
BAY09834
LinkDB
All DBs
Position
3614810..3615940
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AA seq
376 aa
AA seq
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MPFTIMDRYLTSELLPPFLFGVGAFSSIGVTIDAVFDLVRKIVESGLPVDIALQVFLLKL
PTFIVLAFPMSTLLATLMTYSRLSSQSELIALRGCGVSVYRMVLTAVMLSLVVTGLTFVF
NEHIAPAASYQANMTLNNALKSDKPILKQQNIFYPEYRETKAPDGTTNRILTRLFYADQF
DGKRMSGLTVIDRSEEGLNQIVVAESGQWNGSQNVWDFYNGTIYLVAPDRSYRNILRFEH
QQLRLPRTPLSLAEKSRDYGEMNISEALEQLAVEKLGGDRQKIRKLEVRIQQKIALPFVC
VVFGLVGAAMGSVPQRSGRGTSFGISVIVIFSYYFLSFITGALAQANVLSPFMGAWLPNF
IGLGTGLFLLFRVAQR
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacgatcatggatcgctaccttaccagcgaattgctaccgccatttttattt
ggggtgggagctttttcatcaattggagtgacaattgatgctgtatttgacttagtaaga
aaaatcgtagaatctgggctacctgtagacatcgcccttcaagtttttttattaaaactg
ccaactttcattgttttagcttttccgatgtccactctgttggctactttgatgacctac
agtaggctttcgagccagagcgaactgattgccctgcgtggctgtggggtgagtgtttat
cggatggtgctaactgcggtgatgttaagtttggtggtgacagggctgacgtttgtgttt
aacgagcatatagcgccagcagccagttatcaagcaaatatgactttaaacaatgcctta
aagtcagacaaaccaattttaaaacagcaaaatattttttacccggaatatcgcgagaca
aaagcgcctgatggaacgacaaataggatattgacacgcttattttacgccgatcaattc
gacggtaaacggatgagtggtttaacagttatcgatcgttcggaagaaggtctaaatcaa
attgtggtcgcagaatcaggccaatggaacggatcgcaaaatgtttgggatttttataac
ggcacaatttatttagtagctcccgatcgctcttatcgcaacattctgcggtttgaacac
caacaactgcggcttccccgcacaccgttgagtttggcagaaaaaagccgagactacggc
gagatgaacatttccgaagcattagaacagctagcagtagaaaaactcggtggcgatcgc
caaaaaattcgtaaacttgaagtccggattcaacaaaaaatcgccttaccttttgtctgt
gtcgtgtttggtttggtaggtgcagctatgggcagcgtaccccagcgtagtgggcgcggt
acaagctttggtattagcgtcatcgtcattttctcgtattactttctcagctttattact
ggagccttagcacaggcaaatgtgctatctccgtttatgggcgcttggttgcctaacttt
atcgggttgggaacaggcttatttttattgttccgagttgctcaacgatag
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