Calothrix sp. NIES-2098: NIES2098_31590
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Entry
NIES2098_31590 CDS
T08374
Name
(GenBank) cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
caln
Calothrix sp. NIES-2098
Pathway
caln02010
ABC transporters
caln03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
caln00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NIES2098_31590
03070 Bacterial secretion system
NIES2098_31590
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
caln02000
]
NIES2098_31590
02044 Secretion system [BR:
caln02044
]
NIES2098_31590
Transporters [BR:
caln02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NIES2098_31590
Secretion system [BR:
caln02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
NIES2098_31590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
cNMP_binding
SMC_N
Peptidase_C39_2
AAA_22
Peptidase_C70
NB-ARC
Mg_chelatase
AAA_29
Gtr1_RagA
Secretin
DUF3335
Zeta_toxin
Guanylate_cyc_2
Motif
Other DBs
NCBI-ProteinID:
BAY09993
LinkDB
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Position
complement(3803458..3806154)
Genome browser
AA seq
898 aa
AA seq
DB search
MGYSLSEVEFQRCLQQFKFLNPKVGKFWQGTDVEPGIYIVIAGKVRLLDPGGELIATLEK
GASFGEFTLFPEAKFKPYAARASINLHLCFVPSEVLCLLMDNHAPIREHLWQAALFRNSL
QVDPNNSPVTAMSTTGYAYASGFTHKADILSTATPEPPQKKISKAYFPRPTQRVGHLWQR
VTRRYPFFAQQSASDCGAACLVMVSRYWGKRFSVNRLRDIANVDRNGASLRGLLTAAESL
GFATRPVKASLNQLAKQKLPAIVHWEGKHYIVVYEITPKHVIVADPGIGQRTLSHAEFQL
GWTGYTLLLQPTAMLKDAKESSTPFWQFFELLKPHSLVMLEVFIASVFIQIFGLITPLFT
QLILDRVVVQRSQLTLTAVGIGLLIFSLFRVAMTGLRQYLLDHTANRIDLALIVGFIRHT
LRLPLSFFESRYVGDIISRVQENRKIQRFLSGEALSILLDLLTVFIYVGLMFWYSWKMAL
LVLVIVPPFALLALIATPFLQRISREIFNAVANESSYLIEALTGVRTVKATAVEHTVRWH
WEELLNKEIKTNFSGQVISNRLQIFSNAIEAVVTTALLWFGAHLVIQNQLTIGQLVAFNM
LLGNIITPFKRLIVLWNQLQEVVIAVERINDVLDTDPEEDLQHQARQNLPYVRGNIRFEN
VTFRYHPESDVNILENLSFEVKPGQMVALVGRSGSGKTTISKLVLGLYPPTDGKVLIDGQ
DITSISLRSLRQEVGVVDQDTFLFGGTIRENISLGHPGAPLSEVIEAAKLAGADDFIKKL
PMGYETQIGEGGGLLSGGQRQRIAIARALLGNPRLLILDEATSHLDTESERIIQQNLNTI
LQGRTTLVIAHRLSTVQNADMILVLDKGVLIESGTHAELMAKRGHYFYLNQQQLQGVG
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
ttggggtattcgctttcagaagtagaatttcagcgctgtctgcaacaatttaaatttctc
aaccccaaagttggtaagttctggcaaggaactgacgttgaaccaggtatctacattgtg
attgctggtaaggtgaggttgctcgatcctggaggtgagttgatcgctactttggaaaag
ggggcttcatttggagaatttactttatttccagaggctaagttcaagccctatgctgct
agggcttcgataaatttgcatttatgctttgttcctagtgaggtgttgtgcctattaatg
gataatcatgctccaattagggaacatttgtggcaagcagcattatttcgtaattctcta
caggtagatccgaataattccccagtaacagcgatgtctacgacgggctacgcctacgca
tcaggctttacacataaagcagatattttgtcaacggcaaccccagaaccaccacaaaaa
aagattagtaaagcctattttcccagacctacccagcgagtcgggcatttatggcaacgg
gtaactcgtcgctatccatttttcgcccaacagagtgcatcggactgcggtgcagcttgt
ttagtgatggtgtcgcgctattggggtaaacgctttagcgtgaatcgtttgcgggatatc
gccaatgtagaccgcaatggtgcatcgttgcgggggttattaacagcggcggaaagtctt
ggctttgccacaagacctgtaaaggctagccttaaccagttagcaaagcaaaaattgcct
gcaattgtccactgggaaggcaagcattacattgtagtctacgaaattaccccgaaacac
gtcattgttgcagacccaggtattggtcaacgcaccttgagtcacgcagaatttcaactt
ggctggactggttatacactactgctgcaaccgacagccatgctgaaagatgccaaagaa
agttctacccctttttggcagttttttgagttgctaaagcctcacagtctggtgatgctg
gaagtctttattgcttccgtatttatccagatatttggactgattacacccctgtttacc
cagttaattttagatcgagtagttgtacagcgatcgcaactgactttaaccgcagtcgga
ataggtttgctgatttttagcctctttcgggtagcaatgacagggttgcggcaatatctg
ctagaccacacagctaatcgcatagatttagccctaattgttgggtttatacgccatacc
ttgcgcttacccttgagtttcttcgagtctcgctatgtcggggatattatctcccgcgtc
caagaaaaccgtaaaatccaacgcttcctttccggtgaagcattatctatcctcctagat
ttactcacagtatttatctatgtaggattaatgttttggtacagttggaaaatggcattg
ctggtgttggtaattgtaccgccgtttgctttattagcattaattgccacaccttttctc
caaaggatttcccgcgaaatatttaatgctgttgccaatgaaagtagttatttgattgaa
gccttaactggtgtccgaacagtgaaagctacagcagtagagcatacagttcgttggcat
tgggaagagttattaaataaagaaatcaaaaccaacttttctggacaagttattagtaac
cgcttgcaaattttcagcaatgcgattgaagcagtagtgactaccgccttactatggttt
ggggcacatttggttattcaaaaccagctaactattgggcagttagtggcttttaatatg
cttttaggcaatattattacaccatttaaacgcttaatagtcttgtggaatcaattacag
gaagtagtgattgccgtcgaacgcattaatgatgtcttagatacagatccagaagaagat
ttacaacaccaagcacgccaaaatctcccgtatgttcggggaaatatccgctttgaaaat
gtcacattccggtatcatccagaaagtgatgtcaatattttagaaaatctcagttttgaa
gtaaaaccaggccaaatggtagcactagtaggacgtagtggttctggaaaaactaccatt
tctaaattagttttaggcttatatccacctacggatggtaaagtgctaattgatggacaa
gatattactagtatttccttgcgttccttacgccaagaagttggggtagttgaccaagac
acatttttatttggtggaacaattcgcgaaaatattagcttaggacatcccggcgcacct
ttaagtgaagttatcgaagctgcaaaattagcaggtgctgatgattttattaaaaaatta
ccaatgggttatgaaactcaaattggtgaaggtggcgggttgttatctggtggacaacga
caacgcatagctattgctagagccttgttaggtaatccccgactgctaattttagatgaa
gcgacttctcatttagataccgagtcagaaagaattattcagcaaaatttgaacacaatt
cttcaaggaagaactactttagtaattgctcatcgcctttccaccgtacaaaatgcagac
atgattttagtattagacaaaggcgtattaattgaaagtggaactcatgcagaattgatg
gcgaagcgagggcattatttttacctcaatcaacagcaattacaaggcgtaggataa
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