Calothrix sp. NIES-2098: NIES2098_36920
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Entry
NIES2098_36920 CDS
T08374
Name
(GenBank) aromatic amino acid beta-eliminating lyase/threonine aldolase
KO
K04487
cysteine desulfurase [EC:
2.8.1.7
]
Organism
caln
Calothrix sp. NIES-2098
Pathway
caln00730
Thiamine metabolism
caln01100
Metabolic pathways
caln01240
Biosynthesis of cofactors
caln04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
caln00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
NIES2098_36920
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
NIES2098_36920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
caln03016
]
NIES2098_36920
03029 Mitochondrial biogenesis [BR:
caln03029
]
NIES2098_36920
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
caln02048
]
NIES2098_36920
Enzymes [BR:
caln01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
NIES2098_36920
Transfer RNA biogenesis [BR:
caln03016
]
Eukaryotic type
tRNA modification factors
Thiolation factors
NIES2098_36920
Prokaryotic type
NIES2098_36920
Mitochondrial biogenesis [BR:
caln03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
NIES2098_36920
Prokaryotic defense system [BR:
caln02048
]
DNA phosphothiolation system
Sulfur modification proteins
NIES2098_36920
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aminotran_5
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
BAY10520
LinkDB
All DBs
Position
4453650..4454816
Genome browser
AA seq
388 aa
AA seq
DB search
MSIRPIYLDCHATTPVDERVLAAMLPYFTEKFGNPSSISHVYGWEAEAAVKQTREILAAA
INATPEEIVFTSGATEANNLAIKGVAEAYFQKGQHIITVATEHKAVLDPCAYLKTLGFEI
TILPVKKDGLIDLTELEQALRPETILVSVMAANNEIGVLQPLAEIGELCRDLNIIFHTDA
AQAIGKIPLDVQAQKIDLLSLTAHKVYGPKGIGALYVRRRNPRVQLVPQQHGGGHERGMR
SGTLYTPQIVGFGKAVEIALAEQATENQRLTELRQKLWEQLSVVAGIHLNGHPTQRLAGN
LNISVEGVDGAALGLGLQSVMAVSSGSACTSANTAPSHVLTALGRSQQLAYASVRFGIGR
FNTPEEIDIVAKHAIATIQSLRKQTTLV
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgtctattcgccctatctacctagattgccatgcgacgacaccagtcgatgaaagagta
ttagcagccatgctaccttactttacagaaaagtttggcaatccatcgagtattagtcat
gtttacggttgggaagcagaagcagctgttaaacaaacacgagaaattttagcagcagca
attaacgctacaccagaagaaattgtttttaccagtggtgcaacagaagcgaataatcta
gcgattaaaggtgtagcagaagcttattttcaaaaaggacagcatattattacagtggct
acagaacataaagctgttctcgacccttgtgcatatttaaaaactttgggttttgaaatt
actattctcccagttaaaaaagatgggttaattgatttaactgagttagaacaagctttg
cgtccagagacaattttggtatcggtaatggctgcaaataacgaaattggagtattgcag
cctttagcagaaattggagaattgtgccgcgatctcaatatcattttccacaccgatgct
gcccaagctattggtaaaattcccttagatgtgcaggcacagaaaattgatttactttca
cttaccgcgcataaagtatacggccccaaaggtatcggtgcgctatacgttcgtagacgc
aaccccagagtacagttagttccccagcagcacggcggcggacacgaacggggaatgcgt
tcgggtactttatacacaccgcaaatcgtcgggtttggcaaagctgtagaaattgcttta
gcagagcaagcgacagaaaaccaacgcctgacagaactcagacaaaaactctgggaacag
ctttcagtagtagcaggaattcatctcaacggacatcctacccaacggttagcgggaaac
ctgaatatcagtgttgaaggcgtagatggggctgcacttggtttaggattacagtcagta
atggctgtttcttctggttctgcttgtacttcagccaacacagcaccctcccatgttctc
accgccttgggacgctcacaacagctagcctatgcatcagtgcgctttggcattggacgc
ttcaatactccagaggagattgatattgtagcaaaacacgcgatcgctacgattcaaagt
ttacgcaagcagacaactttggtgtaa
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