Calothrix sp. NIES-2098: NIES2098_40480
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Entry
NIES2098_40480 CDS
T08374
Name
(GenBank) transcriptional regulator HrmR
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
caln
Calothrix sp. NIES-2098
Brite
KEGG Orthology (KO) [BR:
caln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caln03000
]
NIES2098_40480
Transcription factors [BR:
caln03000
]
Prokaryotic type
Helix-turn-helix
LacI family
NIES2098_40480
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GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_3
HTH_38
HTH_10
HTH_Tnp_ISL3
HTH_AsnC-type
HTH_26
HTH_31
HTH_23
HTH_7
MarR_2
HTH_24
HTH_11
MupG_N
HTH_Tnp_Tc3_2
HTH_IclR
HTH_AraC
HTH_Crp_2
Rv2175c_wHTH
GntR
HTH_50
TetR_N
HTH_19
Motif
Other DBs
NCBI-ProteinID:
BAY10871
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Position
4866903..4867961
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AA seq
352 aa
AA seq
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MSKRKISIEDIARKAGVSHTTVSRALRDSTLISPKVREEIKQLAREMGYVPNIIAQSLQT
QRTNTIGVVVTSIADPFFSEVVEGIEQIARTSGLSVLLSTSHRDVDLEIAAIDNFHRRRV
DGILVADSRISKHDTKQIGQIAVPTVFIHSQTEDPPEIFHSVSVDDCLGARLAVEHLVSL
GHTSIGYLGVSDRSRSNQQRLEGYQKALSEAGLPQKADWVAISDEYNVRTSDVFTGQQML
PKLVAAGVTGIFCYNDMVAVGAVLACQERGISVPQDLSIVGFDGIALGGYITPPLTTVRQ
PMLEIGRSAMQMLLDLLQEKTVENCVLSPYLIKRGSSAAKRQEVGGRRQKGK
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacgaaaaatctcaatagaagatattgctcgaaaagcaggagtttctcacacc
acggtttcacgcgctttgcgagatagcactctcattagccctaaggtaagagaagaaatt
aagcagttggcgcgagagatgggttatgttcctaatattattgcgcaaagtttacaaact
caacgtactaatactattggggtagtagtaacttcaatagcagatccctttttttcggaa
gtagtagagggaatagaacagatagccagaacatcaggtttaagtgtgttgttgagtact
tcacaccgagatgtcgatctggaaatagcggctattgataattttcatcgccgcagagtg
gacggtattctagtggcggattcacgcattagtaaacatgatacgaagcaaatagggcaa
attgctgtgccaacagtatttattcatagccaaactgaagatccacccgaaatatttcac
tcagtatcagtagacgactgcttaggcgctaggttagccgtagaacatctagtcagtttg
ggacacacttctataggatacctgggcgtaagcgatcgcagcaggtcaaatcagcaacgt
ttagaaggatatcaaaaagctcttagtgaagcaggtttaccccaaaaggctgattgggtg
gcaattagtgatgaatataatgtcagaacaagcgatgtttttacaggtcaacagatgcta
cctaaactagttgcagctggggtgacaggcatcttttgttacaacgatatggtagcggta
ggtgctgttttagcctgtcaagaacgaggaatttcggttccgcaagacttaagcatagtc
ggatttgatggtattgctctgggaggttatatcacccctccactcaccacagttcgccaa
ccaatgttagaaattggtcgttctgcaatgcaaatgttactcgatttattacaggaaaaa
actgtagaaaactgcgttttatctccttatttaattaagcggggtagtagtgcggctaaa
aggcaggaggtaggaggtagaaggcagaagggaaaatga
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