Calothrix sp. NIES-2098: NIES2098_40740
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Entry
NIES2098_40740 CDS
T08374
Name
(GenBank) cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
caln
Calothrix sp. NIES-2098
Pathway
caln02010
ABC transporters
caln03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
caln00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NIES2098_40740
03070 Bacterial secretion system
NIES2098_40740
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
caln02000
]
NIES2098_40740
02044 Secretion system [BR:
caln02044
]
NIES2098_40740
Transporters [BR:
caln02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NIES2098_40740
Secretion system [BR:
caln02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
NIES2098_40740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
cNMP_binding
Peptidase_C39_2
SMC_N
Peptidase_C70
AAA_22
NB-ARC
DUF3335
RsgA_GTPase
Guanylate_cyc_2
AAA_29
nSTAND3
Gtr1_RagA
IstB_IS21
TsaE
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BAY10897
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Position
4893309..4896044
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AA seq
911 aa
AA seq
DB search
MAEYISELLSLQQLCTVLGYSLSSEDLQPCLTQVKSLTPKVGKFWQGTDVEPGIYIVLAG
KVRLLDETGELIATLEVGESFGEFTLFQEAGFKAYAARASVNLHLAFLSGEALSPLISKY
PQIYEHLRTKARSRNSLLVQSDSEPVSPNLPQQFAKREEQTITSPAPVSNLQKKISKAYF
PNPTQRVGHLWQRVTKNYPFFAQQSSSDCGAACLVMVSRYWGKRFSVNRVRDIANVDRNG
ASLRGLSAAAESIGFNTRPVKASLDQLGKQKLPAIVHWQGKHYIVVYEITKKYVIVADPA
IGQRTLTHREFKADWTGYTLLLQPTALFKDTEESTTPFWQFFELIKPYGLVMLEIFLASL
FIQIFGLIAPLFTQLILDRVVVQRSELTLTAVGLGLLIFNLFRVALTGLRQYLLDHTANR
LDVALIVGFIRHTLQLPLSFFETRYVGDIISRVQENRKIQRFLSGEALSTLLDLLTVFIY
LGLMFWYSWKMALLCLVIVPPFFLLALIATPFLKKISREIFSAYNQESSYLIETISGVRT
VKSTAIEQTVRWHWEELLHKAVKTNFAGQIIGNRLQIFSNSIQAVVTTALLWFGAHLVIQ
NQLTIGQLVAFNMLLGTIISPFQRLAVLWNQLQEVVISMERINDVLDTEPEENLQHQIRQ
SLPSIQGEVRFENVTFRYNSESDTNVIENLSFQIKPGQMVALVGRSGSGKTTISKLVLGL
YLPSDGKILVDGCDITNISLRSLRQQVGVVDQDTFLFGGTIRDNISLGHPGAKLEEIIEA
AKLAGADEFIKKLPMGYETQIGEGGGMLSGGQRQRIAIARALLGNPRLLILDEATSHLDT
ESERIIQKNFNTILKGRTTLVIAHRLSTVRNADLILVLDKGVLIESGNHQELMARRGHYF
YLNQQQLDASA
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggcggaatatatatcagagttgctgtctttgcagcaattatgtactgtcttgggttat
tctctctcttcagaagacttacagccctgccttacccaagttaaatctcttacacccaaa
gtagggaaattttggcaaggaacagatgttgaaccaggtatctacatcgtacttgcaggt
aaagtcagattgcttgatgaaacaggtgaactgattgcaaccttggaggtaggagaatca
tttggtgaatttaccttatttcaggaagctggttttaaagcttatgcagcaagagctagt
gtcaatttacacttggcttttctttctggggaagcgctgtcaccattgataagcaaatat
ccccaaatttacgaacatttacgtaccaaagcgcgatcgcgaaattccctgttagtccag
tctgacagcgaaccagtatctcccaatctgccacaacagtttgctaaacgagaagaacag
actattacttccccagcaccagtaagtaatctacagaaaaagattagcaaagcctacttt
cccaaccccacacaaagagtaggtcatttatggcagcgcgtcactaaaaactatccattt
tttgcccaacagagttcatcagactgcggtgcagcttgtttggtgatggtgtctcgttat
tggggaaaacgctttagtgttaatcgcgtgcgagatattgctaatgttgaccgcaacggt
gcatctctgcggggattgtcagcagcagcagaaagtatcggatttaacactagaccagtc
aaagctagtctcgaccagctagggaagcaaaaactacctgcaattgttcactggcaaggc
aagcattacatagttgtctatgaaatcaccaagaaatatgtgatagttgcagaccccgcc
attggtcagcgtaccctcactcatcgggaatttaaagcagattggactggatatacttta
ctgttgcaacctacagcccttttcaaagataccgaagagagtacaacacccttctggcaa
ttctttgaattaatcaaaccgtacgggttggtgatgctggaaatatttctagcttccctt
tttattcaaatatttggattgattgcacctttatttacccaacttattctcgatagagtg
gtggtgcagcgttctgaattgaccttaacagctgtaggtttagggttgctaattttcaat
ctgtttcgggtagcactaacaggtttgcggcaatatttactagatcatacagctaatagg
ctagatgtagctttgattgtgggatttatccgtcataccctacaacttcctttaagtttt
tttgaaactcgttatgttggggatattatttctcgagttcaagaaaaccgcaaaattcaa
cgttttctctctggtgaagcattatcaaccctcttagatttacttacagtatttatctat
ttagggctaatgttttggtacagttggaaaatggcattattgtgcttggtaattgtaccg
ccattctttttattagcattgattgccacaccctttttaaagaagatttctagggaaata
tttagtgcttataaccaagaaagtagttatctcattgaaactatttctggggtaagaaca
gtaaaatcgacagccatagaacaaacagttcgctggcattgggaagagttattgcacaaa
gcagttaaaactaattttgctggacaaattattggaaatcgtctgcaaatttttagtaat
tctattcaagcagtagtcactacagcattgctatggtttggggcacatctagtaattcag
aatcagttaacaattgggcagcttgtggcatttaatatgctgttagggactattattagc
cctttccaacgtttagcagtattgtggaatcaattgcaggaagttgtcatttcaatggaa
cgcattaatgatgtgttagacaccgaacctgaggagaatttacaacatcaaatcagacaa
agcttaccttcgattcaaggtgaagttcggtttgaaaatgtcacatttcgctataactca
gaaagcgatactaatgtaattgaaaatctcagctttcaaattaaaccagggcaaatggta
gcactagttgggcgtagtggttctgggaaaactacgatttctaagttagttttaggctta
tatcttcctagcgatggcaaaatcttagttgatggatgcgatattaccaatatctcttta
cgttccttacgccaacaagttggagtagttgaccaagatacctttttatttggtggtaca
attcgtgacaatattagcttaggacatccaggagccaaattagaagaaatcatcgaagcg
gcaaagctagctggtgctgatgaatttattaaaaaattgccaatgggttatgaaacccaa
attggtgaaggcggagggatgctatctggaggacagaggcaaagaattgccatagctaga
gctttattaggtaatcctcgcttattaattttagatgaggcaacttctcatttagataca
gagtcagaacgcattattcagaagaacttcaacacaattctcaagggaagaactacctta
gtaattgcccatcgtctttccaccgtcagaaatgcagatttgattttggtattagataaa
ggcgtgttgattgaaagtggaaatcaccaagaattgatggcaagacgcggacattatttt
tatctcaatcagcaacagttagacgcatcagcataa
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