Calothrix sp. NIES-2098: NIES2098_41130
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Entry
NIES2098_41130 CDS
T08374
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
caln
Calothrix sp. NIES-2098
Brite
KEGG Orthology (KO) [BR:
caln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caln03032
]
NIES2098_41130
03400 DNA repair and recombination proteins [BR:
caln03400
]
NIES2098_41130
Enzymes [BR:
caln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NIES2098_41130
DNA replication proteins [BR:
caln03032
]
Prokaryotic type
DNA Topoisomerases
NIES2098_41130
DNA repair and recombination proteins [BR:
caln03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NIES2098_41130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF3294
Motif
Other DBs
NCBI-ProteinID:
BAY10936
LinkDB
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Position
complement(4944500..4947100)
Genome browser
AA seq
866 aa
AA seq
DB search
MTTSQERIIPTDLRNEMSRSYLEYAMSVIVGRALPDARDGLKPVHRRILYAMHELGLTHD
RPFRKCARVVGEVLGKYHPHGDTAVYDALVRMAQDFSMRSPLINGHGNFGSVDNDPPAAM
RYTECRLQALTSTALLHDIESETVDFIDNFDGSQQEPTVLPSRIPQLLLNGSSGIAVGMA
TNIPPHNLGELIDGLVALIHNPEITNLQLMQYIHGPDFPTGAQVLGTAAIKEAYTTGRGS
ITMRGVANIETIEQRGRPEREAIIITELPYQTNKAALIEKIAELVNEKRIEGIADIRDES
DRDGMRIVIELKRDAYPRVVLNNLYKQTPLQANFGANMLALVNGEPQTLTIKQFLEVFLD
FRIESINRRTRYELRKAEERDHILQGLLIALAHLDAIINLIRHASDAPTAKGELITTYGL
SEVQADAILQMQLRRLTALEADKIRQEHEDLQAQIADLQDILARRERVLSIIEDEVTQIK
TSFATPRRTVITHAEGEIDDLDLIANEKVLILLTEQGYIKRMPVNTFEAQSRATRGKAAA
KVKDDDTIEHFLTCCDHDSVLFFSDRGVVYCLKAYQIPVGSRTSRGTPIVQMLPIPKEEK
ITSIVPVDEFTSEEYLVMLTKGGNIKKTELAAFSNIRANGLIAISLEEGDQLRWVRRARV
EDSVIVGSRQGMAIHFRCNHEQLRPLGRATRGVKSMKLKPGDELVGMDILPAAILDTLST
DSEIEAEIEEILEVEDTENEESAEVPANASSGPWVLVITMNGYGKRVPVAQFRLQNRAGQ
GLMATKFKNRKTKDQLATLQIVNCDDEIMMVTNRGIIIRQAVNAISVQSRSATGVRVQRL
DEDDAITGVAIVPPDTGDTGLLEEAE
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgacaacctcacaggagaggattatcccgacagatctgcggaacgaaatgtcccggtct
tatctggaatacgccatgagtgtgattgtgggtcgggcgctgccagatgccagggatggt
ctgaaacctgtgcatcgtcgcatcctctacgcaatgcacgagctaggtttgacgcacgat
cgcccattccgtaaatgcgcccgtgtggttggggaagttttaggtaaatatcacccccac
ggcgacacggcagtttatgatgccttggtgcggatggcacaggatttttccatgcgatcg
cccttaatcaacgggcatggtaactttggttccgtagataacgatccaccagcggcaatg
cgatacacagaatgtcgcttgcaagccttaactagcacagctttactacacgatatcgaa
tcggaaaccgtagattttattgataacttcgacggttcccaacaagaaccaacagttcta
ccatcacggattccccagctgttgctgaatggttcctctgggattgctgtggggatggca
acaaacatcccgccacacaatttaggcgaattgattgatggattagtggcattaattcac
aatccagaaatcaccaatcttcagttaatgcagtatatccacggcccagactttcccact
ggggcgcaggttttaggaactgccgcaattaaagaagcttacaccactgggcgcggttcg
attaccatgcgcggtgtagctaacatcgaaaccattgagcaaagaggacgtcccgaacga
gaagcaattatcatcaccgaattgccttatcaaaccaacaaagccgcattaattgaaaaa
attgccgagttggtgaatgaaaagcgtatcgagggaattgcagatatccgggatgaaagc
gatcgcgatgggatgcgtatcgttatcgaactcaagcgtgacgcctatcctagagtagta
ctgaataacctctacaagcaaaccccactgcaagccaactttggggcgaatatgctggcg
ttggtgaatggagaaccccaaacccttaccatcaagcagttcttagaagtcttcctcgat
tttcgtattgaatcgattaacagacgcacgcgttacgaactgcggaaagcggaagaacgc
gaccatatcctgcaaggcttgttaattgccttggcacatttagatgccatcattaacttg
attcgtcatgcttccgatgcacccacagccaaaggcgaactaattaccacctacggacta
tcggaagttcaagccgatgcgattttacaaatgcaactgcggcggttaactgccctagaa
gcagataaaattcgccaagaacacgaagatttacaagcgcaaattgccgatctgcaagat
attttggcacggcgggaaagagtgctatcaatcattgaagacgaagtcacccaaatcaaa
actagcttcgccacaccccgacgcacagtaattacccatgcagaaggtgaaattgatgac
ctcgatctgatcgccaatgaaaaagtactaattctgctgacagagcaaggttacatcaaa
cggatgccggttaacacctttgaagcccaaagcagggctaccagagggaaagcagccgcc
aaagtaaaagatgatgacaccatagaacatttcttgacttgctgcgatcacgacagcgtt
ttattctttagcgatcgcggtgtcgtttactgtctcaaagcttatcaaattcccgtgggt
tctcgtaccagtcgtggtacgcccattgtgcaaatgttacctattcccaaggaagaaaaa
attacttccattgtcccagttgatgagtttaccagtgaagaatatctggtgatgctcacc
aaaggtggcaatatcaagaaaaccgaattggcagcatttagtaacattcgcgccaacggc
ttaatcgcaatttccttagaagaaggcgaccaactgcgctgggtaagacgcgctagggta
gaagacagcgtaattgtcggttcccgtcaggggatggcgattcactttagatgtaaccac
gaacaattgcgtcccctaggtagagcaactcgtggtgtcaaatccatgaaactcaaacct
ggtgatgaattagtcggcatggatatacttcccgccgccattctcgacaccttgagtaca
gatagcgaaatcgaagccgagattgaagaaatcctcgaagtcgaagataccgaaaatgaa
gagtccgcagaagtaccagctaacgctagtagcggcccttgggtattagtaattacgatg
aatggctatggtaagcgcgtccccgttgcccagttccgcttgcaaaatcgcgccggtcaa
ggtttaatggcaaccaaattcaaaaaccgtaaaaccaaagaccaattagccaccttgcaa
atcgtcaactgtgacgacgaaattatgatggtaacaaatcgcggtattattattcgccaa
gcggtgaatgccatttccgtacaatcgcgatcggcaacaggcgtgagagtgcagcgctta
gacgaagatgacgccatcaccggagtagctatagttcctcctgatactggcgatacgggt
cttctagaagaagcagaataa
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