Calothrix sp. NIES-2098: NIES2098_43240
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Entry
NIES2098_43240 CDS
T08374
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
caln
Calothrix sp. NIES-2098
Pathway
caln04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
caln00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
NIES2098_43240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
caln03016
]
NIES2098_43240
Enzymes [BR:
caln01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
NIES2098_43240
Transfer RNA biogenesis [BR:
caln03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
NIES2098_43240
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
NAD_synthase
QueC
Arginosuc_synth
DUF7411
Asn_synthase
ThiI
Motif
Other DBs
NCBI-ProteinID:
BAY11147
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All DBs
Position
complement(5172777..5173832)
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AA seq
351 aa
AA seq
DB search
MKKVVVGLSGGVDSSTAAAILHNQGYEVVGLTLWLMKGKGQCCSEGMIDAANICEQLGIP
HQVVDIRDVFQTNIVDYLVTGYSAGITPLPCSQCNKTVKFGPMVQYAREQLGCDRIATGH
YARISYDEATGRYQLLRAVDRNKDQSYFLYDLSQDLLAASVFPLGELQKADTRRIAAEYG
LATADKPESQDLCLVESNGSMRAFLDKYLAPKKGDIVDTSGKVLGQHDGVHHYTIGQRKG
LGIAAPEPLYVIELDAVNNKVIVGDRTKATQPECTVNRVNWVSIAEPSTPIHAEVQIRYR
SHPTPVTVIPLENSRVRLVFDEPQFSITPGQAAVWYEGDKVLGGGIIEQFS
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagtcgtcgttggtctttccggtggcgttgacagttccaccgccgctgccata
ctacacaatcagggctatgaagttgttggtttgaccctttggctgatgaaaggcaaaggt
cagtgttgctctgaaggaatgatcgacgcggctaatatctgcgaacaattgggaattccc
catcaagttgttgatattcgcgatgtctttcaaacaaatattgtcgattacttagtgact
ggttatagtgctgggatcacacctttaccttgctcgcagtgtaacaaaactgtgaaattt
gggccaatggtgcagtatgcgcgcgaacaattgggatgcgatcgcattgctacgggtcat
tatgccagaattagctatgacgaagctactggacgctatcaattgttaagggcggttgac
cgtaataaagaccagtcctacttcctctatgatttgtcgcaggatttacttgcagcttcc
gtatttcccctaggcgaattacaaaaagctgacacgcggcgcatcgctgctgaatacgga
ctcgcaactgccgataaaccagaaagccaagacttgtgcctagtggaaagtaacggttcg
atgcgggcatttctcgataagtatctcgcccccaaaaaaggcgatattgtcgatacttcg
gggaaagttttaggtcaacatgatggtgtccatcattacacgattggacagcgtaaaggc
ttggggattgctgcacccgaaccattgtatgtgattgaattagatgcggtgaataataaa
gtgatagtaggcgatcgcactaaggcaactcaaccagaatgcaccgtcaatcgcgtaaat
tgggtttctatcgctgaaccatccaccccaattcatgcagaagtccaaattcgctatcgt
tcccatcccacaccagtgacagtaattcctctggaaaactcccgcgtgcgcttggtgttt
gatgaaccccagttcagcatcacccccggacaagctgcggtgtggtacgaaggggataaa
gtcttaggtggtggaattatcgaacaatttagttaa
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