KEGG   Calothrix sp. NIES-2098: NIES2098_43640
Entry
NIES2098_43640    CDS       T08374                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
caln  Calothrix sp. NIES-2098
Pathway
caln02024  Quorum sensing
caln03060  Protein export
caln03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:caln00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    NIES2098_43640
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    NIES2098_43640
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    NIES2098_43640
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:caln02044]
    NIES2098_43640
Enzymes [BR:caln01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     NIES2098_43640
Secretion system [BR:caln02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   NIES2098_43640
  Eukaryotic Sec-SRP protein
   NIES2098_43640
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 Zeta_toxin CbiA ArsA_ATPase AAA_16 AAA_33 ParA ATPase PTH2 nSTAND3 AAA_25 AAA_30 6PF2K PTS_EIIC APS_kinase PARP_reg CysA_C_terminal AAA_28 AAA_19
Other DBs
NCBI-ProteinID: BAY11184
LinkDB
Position
complement(5212106..5213563)
AA seq 485 aa
MFDALADRLESAWKKLRGQDKISQSNIQDALREVRRALLEADVNLQVVKDFITEVEAKAQ
GSEVIAGVRPDQQFIKIVYDELVQVMGEENVPLAEVQGEPTIVLMAGLQGTGKTTATAKL
ALHLRKLDRSCLLVATDVYRPAAIDQLITLGKQIDVPVFELGSDADPVEIARQGVERARA
EGVNTVIIDTAGRLQIDEDMMAELAQIKATVQPHETLLVVDSMTGQEAANLTRTFHEQIG
ITGAILTKLDGDSRGGAALSVRQISGAPIKFVGVGEKVEALQPFYPDRMASRILGMGDVL
TLVEKAQEEIDLADAEKMQEKILSAKFDFTDFLKQLRLLKNMGSLGGIIKMIPGMNKLSD
DQLKHGETQLKRCEAMINSMTRQERHDPDLLASSPSRRRRIATGSGYKESDVSKLVADFQ
KMRSLMQQMGQGQFGGMPGMFGGGMGNAFAGAGNRPAAPGWRGYTGNPAAKKKKKEKKKK
GFGNL
NT seq 1458 nt   +upstreamnt  +downstreamnt
atgtttgatgcattagccgatcgtttagaatctgcctggaagaaactccgcggacaagat
aaaatttctcaatccaacattcaagacgctttgcgagaagttcgccgcgctttgttggaa
gcagatgtcaacctccaggtagtcaaagattttattaccgaagtcgaagccaaggcacag
ggatctgaggtgatcgctggcgtgcgacctgaccaacagttcatcaaaattgtttacgat
gaactggtgcaggtgatgggggaggaaaatgttcccctcgcagaagtgcagggagaacct
accattgtgctgatggctgggttgcaaggtactggtaaaactaccgctactgctaagtta
gctttacatctacgtaaattagaccgcagctgcttgttagtcgccacagacgtatatcgc
ccagccgcgatcgatcagctcataactttaggtaagcaaattgatgtacctgtatttgaa
ctgggaagcgacgccgacccagtagaaattgcccgccaaggtgtagaacgcgcaagggca
gaaggcgtgaatacggtaatcatcgatactgctgggcgtctgcaaattgacgaagacatg
atggcagaactagcccagattaaagcaacagttcagcctcacgaaaccttactagttgtg
gactccatgactggtcaggaagccgcaaatcttacccgtacctttcacgagcaaatcggg
attactggagcaattcttaccaagctagatggtgatagccgtggtggtgctgcactttca
gtacgtcaaatctccggtgcgcctattaagtttgtgggcgtaggcgagaaagtcgaggcg
ctgcaaccattttacccagaccgcatggcatcgcggattttgggtatgggcgatgtcttg
accttggtagaaaaagcccaggaagaaattgacttggcagatgccgagaaaatgcaggag
aaaatcctgtcagcgaagtttgacttcaccgactttctcaagcaactgcgcctgttgaaa
aacatgggatcgctgggtgggatcatcaagatgattcccggaatgaataagctttccgat
gaccagctaaagcatggagaaacccagctaaaacgctgtgaagccatgattaactccatg
acccgccaagaacgtcacgacccggatttattagcgagttctcctagcagacggcgacgg
attgcgactggatctggctacaaagagtccgacgtgagtaaattagttgctgatttccag
aaaatgcgatcgcttatgcagcaaatgggtcaaggtcaatttggcgggatgcccggaatg
ttcggtggtggtatgggcaacgccttcgccggagcaggcaatcgtcccgccgcccccgga
tggcgaggttacactggcaacccagccgcgaaaaagaaaaagaaagagaaaaaaaagaaa
ggcttcgggaatctttaa

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