Calothrix sp. NIES-2098: NIES2098_45410
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Entry
NIES2098_45410 CDS
T08374
Name
(GenBank) cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
caln
Calothrix sp. NIES-2098
Pathway
caln02010
ABC transporters
caln03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
caln00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NIES2098_45410
03070 Bacterial secretion system
NIES2098_45410
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
caln02000
]
NIES2098_45410
02044 Secretion system [BR:
caln02044
]
NIES2098_45410
Transporters [BR:
caln02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NIES2098_45410
Secretion system [BR:
caln02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
NIES2098_45410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
cNMP_binding
SMC_N
Peptidase_C39
AAA_22
ABC_ATPase
DUF87
AAA_16
AAA_29
AAA_30
RsgA_GTPase
AAA_25
nSTAND3
Baculo_p74
Motif
Other DBs
NCBI-ProteinID:
BAY11358
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All DBs
Position
complement(5419706..5422705)
Genome browser
AA seq
999 aa
AA seq
DB search
MTYIKNAFEEFLRTVEGFDQLPSEEIANLSQQLQAWRYRIGQKIIGKEVIPERITIIYEG
QVRLLGYDPQTQMPVTLKLLQPGEILGEIGFLRQVACETAIASTEIVCLTLSTVEYLRLL
SAYPAFANTRKNRAHIIEVFDVLGWQLEQQALASANLKELSEQALPDAKVHYLPPGRNPS
YQLDRESIWFVSGSGTVKNLSTGSRLELTDGGPIEVQGPNSIRLIGLEPSDLYFLNNQPA
QLQQVNDTRPQIADALDIPYATEEEVPLSSASKSTQKHLKYPFFRGTGEINSAFACFQML
SKHLQIPFRREVVRRILTEQMRKQGTLSFQLCAYLSELIGLKANLVDIPATSITRIPTPA
LIRYGDSFAVLYAADANTVVVGVPSQGIVRCKPAELVARLEVDEASMPPQVRVLLVSTTN
ETPQERFGLRWFIPYLSRHRRVLIEVFIASFFVQLAALANPLVIQLIIDKVIVQNSISTL
NVLGVLLLVVGIFEAILTTLRTYLFVDTTNRIDMSLGSQIIDHLLRLPLRYFERRPVGEL
STRINELENIRQFLTGTALTVGLDAVFSVVYIIVMLFYSWQLTLVGLGTIPVFVVITLIA
SPTVSRQLRSKAERNAETQSYLVEVMSGIQTVKAQNIELRSRFSWQERYARYVAAGFKTV
VTSTLANSTSNFLNKLSSLLVLWVGAYLVLKGELTLGELIAFRIISGYVTSPILRLAQLW
QSFQETALSLERLSDIVDTPEEAESNRQNIPLPAIVGAVKYENVSFRFAASGPLQLSNVN
VEIPAGEFVGIVGQSGSGKSTMMKLLLRLYEVESGRILIDGYDIGKVELYSLRRQMGVVP
QDPLLFDGTVQENIALTNPDATTEEIIEAARIAAAHEFIMGLPNGYNTRVGERGAALSGG
QRQRIAIARSVLQRPKLLVLDEATSALDYPTERQVCLNLAQEFKGSTVFFITHRLSTVSH
ADTIIVMDNGRITEQGSHQELMAAKGHYFYLYQQQEVNL
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgacttatattaagaacgcctttgaagaatttctgcgtaccgttgaaggttttgaccaa
ttacctagtgaagagattgcgaatctatcgcaacaactacaagcttggcgctaccgcata
ggtcaaaaaattatcggcaaagaagtaattccagaacgaatcacaatcatttatgaagga
caagtacgccttttaggatacgatccccagacgcaaatgccagtaaccttaaagttgctg
caaccaggagaaatcctaggtgaaatcggttttttgcgtcaggttgcttgcgaaactgcg
atcgcctccacggaaatagtatgtttaaccttaagtacggttgaatatttacggctactc
tctgcatacccagcttttgccaatacccgtaaaaaccgcgctcatattattgaagttttt
gatgtcttaggttggcaattagaacagcaagctttagctagtgctaatctcaaagaactt
tcagaacaagctttaccagacgcgaaagtacattaccttccgccgggaagaaatccatct
taccaactcgatcgggaaagtatttggtttgtcagtggtagcggtacagtcaagaattta
tctacaggttcgcgtttagaactaactgatggcggccccatcgaagttcaagggccaaat
tctatacgcttgattggtttagaaccatcagatttatatttcctgaataatcaaccagcc
caacttcagcaggtaaacgataccagaccacaaattgcagatgcactagatattccctac
gccactgaggaagaagtacccttatcatctgcatctaagagtacacaaaaacacctaaaa
tatcctttcttccgcggtactggggagataaattccgcctttgcctgttttcaaatgctg
tctaagcacctacaaatcccatttcgtagggaagtagtgcgccgcattttaacagagcaa
atgcgaaagcaaggcactttatcatttcagctttgtgcctatctatcggagttaatcgga
ctcaaggctaatctagtagatatacctgctacctcgattacccggattccgacaccagca
ttgattcgctatggtgatagttttgcggttttatatgcagccgacgccaatactgtagtt
gtcggtgtaccatctcaaggcattgtgcgctgtaaaccagctgaactggtagctcgctta
gaagtcgatgaagctagtatgccgcctcaggtgcgggtattgctggtgtctaccaccaac
gaaacacctcaagaacgctttggtttgcgatggtttattccctatttgtcgcgccaccgt
cgtgtcttgatagaagtatttattgcttcgttttttgtgcaattggcagcactagctaac
ccactggttattcagctaattattgataaagtcatcgttcaaaatagtattagcaccctc
aatgttttgggtgtgttgctattggtagtcggcatatttgaagcaatactaactacattg
cgaacctacctatttgtcgatactaccaaccgcattgatatgagtttggggtcgcaaatt
attgaccacttactccgcctaccactacgctattttgaacgccgaccagtaggtgaatta
tctactcggatcaacgaactagaaaatatccgacaattccttactggtacagctttaaca
gtgggattagatgcagtattttcggtggtttatatcatcgtcatgctgttttatagttgg
caactcaccttagtaggtttgggcacaattcctgtctttgtcgtcatcactttaattgct
tctcctacggtgagcagacagttgcgtagcaaagccgaacgaaacgccgaaactcagtct
tatttagttgaggtgatgtcgggaattcaaacagtaaaagcgcaaaatatcgaattgcga
tcgcgcttttcttggcaagagcgttatgctcgttatgtcgccgctggttttaaaactgtt
gttacttctacactggctaattctacaagtaactttcttaacaaactcagtagtttacta
gtgttgtgggtaggagcttatttggtacttaaaggcgaattaaccttaggtgaattaatc
gcctttagaattatctctggttacgttaccagcccgatattgcgtttggctcaactttgg
caaagcttccaagaaacagccttatctttagaacgcttaagcgatattgtcgatacccca
gaagaagcagaaagcaatcgtcaaaacattcccttacccgcaattgtgggagcagtgaaa
tatgaaaacgtttccttccgctttgctgctagcgggccattgcaactttctaacgtcaat
gttgagattccagcgggtgaatttgtcggcattgtcggacagagtggatctggtaaaagt
acgatgatgaagttactgctgagactttatgaggtcgagtctggcaggattttaatagat
ggttacgatattggcaaagtagaactttattcgctgcgacgacagatgggtgtagtaccg
caagatccgctgttgtttgacggtacagttcaggaaaatattgctctgactaatcctgat
gcgacaaccgaagaaattatcgaagcggcgcgcattgccgctgcccacgaatttattatg
ggactgcctaacggttacaatacccgtgtaggcgaacggggtgcagcgctttcgggcgga
caaagacaaagaattgcgatcgccaggtctgttttacaaagacccaagttattagtttta
gatgaagctactagcgctctagattaccctacagagcgacaagtctgcctcaatttagct
caggaatttaaagggagtacggtattttttatcactcaccgcctgagtaccgttagtcat
gcagatacaattatcgtcatggataacggcagaattacagaacaaggaagccatcaagag
ttaatggctgcgaaagggcattatttctacctttatcagcagcaagaagttaacctgtaa
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