Calothrix sp. NIES-2098: NIES2098_45510
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Entry
NIES2098_45510 CDS
T08374
Name
(GenBank) lytic transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
caln
Calothrix sp. NIES-2098
Brite
KEGG Orthology (KO) [BR:
caln00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
caln01011
]
NIES2098_45510
Enzymes [BR:
caln01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
NIES2098_45510
Peptidoglycan biosynthesis and degradation proteins [BR:
caln01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
NIES2098_45510
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
TPR_6
TPR_14
Wzy_C_2
Gag_p24
TPR_19
TPR_16
Motif
Other DBs
NCBI-ProteinID:
BAY11368
LinkDB
All DBs
Position
complement(5430616..5432811)
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AA seq
731 aa
AA seq
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MLKQLKKNPIPLIAGAGLCAFLAGAMVSAPEIGKSLGQWLKHGNNSPEQISETTKAKSAV
YPLVSQSLPERAAKLADIAQNSRTLDRERARYLLASDYIERTQAKKALVLLEGLDKDYPL
LAPYILLKQAQAEDMLGEDGKASDLRQKVLKQYPKTAAAVKAIYLIAQPKQQDLAIAQFP
SHPLTWEIIRKRLEQNPNQPQLELILAKYAANQPGTVAVLDNLAKGFTLKPEDWEIIGTA
YWTNNIFDKAANAYAKAPKTPLNLYRAGRGLQVTGKEKDKAIAIYKQLVQQFPEAPESGT
ALLRLAEMAKTRKDALPYLNQAIAKFPDAASKALVEKAKIFQGLKDNNSAQQAWQLLISK
YGNSDEAAEYRWKIAQEKAAVRDYAGAWQWAEPITTNNPTSILAPRAGFWVGKWATQLGK
QQEAKTAYEYVISQFPYSYYAWRSAAILGLNVGNFNTVRQLKPEVVPPQRPVPTAGSETF
KELYLLGQDRDAWLQWETEFQNKDKPTVAEQFTEGLMQLARGENKLGIDTISKLEDRETP
EEQAEYQALSKQSIYWQARYPFPYLQEIEKWSNERQLNPLLVTALIRQESRFESKAKSIA
NAMGLMQVLPSTANWIAPQIKVDSKKLQLEDPNDNIMLGTWYLDHTHQQYNNNSLLAIAS
YNAGPGNVSKWLQTIPTQDPDEFVEKIPFDETKNYVRQVLGNYWNYLRLYNPEISALVGQ
YSTAHPKLPTQ
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagcagcttaaaaaaaatccaattcctctaattgctggtgcaggactatgtgcc
tttttagccggggctatggtgtcagcacctgagattggaaaatccttagggcaatggcta
aaacatggcaataattcacctgagcagatatcggaaaccactaaagccaaatcagccgta
tacccactggtatcacaatctctgccagaacgagccgcaaaactagcagatatcgcccaa
aattctcgtactctcgatcgagagcgtgcgcgttatttgttagctagcgattacattgaa
agaacacaagcgaaaaaagcactggttttactagaaggattggataaagactatccactc
ctcgccccttacattttgctgaaacaggcccaagccgaggatatgttgggtgaagatggc
aaagcttcagatctgcggcaaaaagtgctgaaacagtatccaaaaacagcagcagcagtg
aaagccatctatttaattgcgcaaccaaagcaacaggatttagcgatcgcgcaatttccc
tctcatcctctaacctgggaaattatccgcaagcgcctcgaacaaaaccccaatcagccg
caattagaattaattttggcaaaatacgccgctaaccaaccaggaacagttgctgtcttg
gataacttagcaaaaggttttactctcaaacccgaagattgggaaattattggtacagct
tactggacaaacaacatatttgataaagctgccaatgcttatgcgaaagctcccaaaaca
ccacttaacctctatcgtgctggacggggtttgcaagtaacaggtaaggaaaaagacaaa
gcgatcgcaatttataaacaactggtacagcaatttcccgaagcgccagaaagtggcaca
gctttattgcggttagcagaaatggcaaaaacccgtaaagacgctttaccatatctaaac
caagcgatcgccaaatttcctgatgcagctagtaaagcattggtagaaaaagccaaaatt
ttccaaggactcaaggataataattcagcccaacaagcatggcaattactgatttctaaa
tacggcaattctgatgaagccgcagaataccgttggaaaatcgcccaagaaaaagccgca
gttagagattatgcaggtgcttggcaatgggcagaaccaattaccaccaacaaccctact
agcattttggctcccagagcaggtttttgggtaggtaaatgggcaactcaattaggaaag
cagcaagaagcgaaaaccgcttatgaatatgtaattagccagtttccttactcttactac
gcatggcgatcggctgcaatcttggggttgaatgtcggtaactttaataccgtgcgtcaa
ctcaagccggaagtagttccaccgcaacgtcctgtaccaactgctggttcggaaactttc
aaagaattgtatctgttaggacaagaccgagatgcttggttgcaatgggagacagaattt
caaaataaagacaagccgacggtagccgaacaattcaccgaaggtttaatgcaactagcc
agaggcgaaaataaattaggaattgatacgatttctaaattagaagatcgagaaacccca
gaagaacaagccgaatatcaagccctcagcaaacaaagcatttattggcaagctcgttat
ccctttccttatctgcaagaaattgaaaagtggtctaacgaacgtcaactcaatcctttg
ctagtaactgctttgattcgtcaagagtcgcggtttgaatctaaagccaaatccatcgct
aatgctatggggttaatgcaagttttaccaagcacagctaattggatcgctccacaaatt
aaggtagatagcaaaaaacttcagctagaagatccgaacgacaacattatgctgggaact
tggtatttggatcatacccatcagcaatataacaataactccctgcttgcgatcgctagt
tacaatgctggacctggcaacgtttccaaatggctgcaaactatccccacccaagatcca
gatgaatttgtcgaaaaaatcccctttgatgaaactaaaaattacgtgcgtcaagtctta
ggtaactattggaattatttgcgactatacaacccagaaatttctgccttagtcggacaa
tactcaaccgcgcatcctaaattgccaacgcagtga
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