Calothrix sp. NIES-2098: NIES2098_48010
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Entry
NIES2098_48010 CDS
T08374
Symbol
rpsD
Name
(GenBank) 30S ribosomal protein S4
KO
K02986
small subunit ribosomal protein S4
Organism
caln
Calothrix sp. NIES-2098
Pathway
caln03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
caln00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
NIES2098_48010 (rpsD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
caln03011
]
NIES2098_48010 (rpsD)
Ribosome [BR:
caln03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
NIES2098_48010 (rpsD)
Bacteria
NIES2098_48010 (rpsD)
Archaea
NIES2098_48010 (rpsD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S4
S4
S4_2
Vp25_capsid
Motif
Other DBs
NCBI-ProteinID:
BAY11616
LinkDB
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Position
complement(5751488..5752096)
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AA seq
202 aa
AA seq
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MSRYRGPRLRIVRRLGDLPGLTRKSARRAYPPGQHGQNRKKRSEYAIRLEEKQKLRLNYG
LTEKQLLRYVRKARRVTGSTGQALLQLLEMRLDNTVFRLGLAPTIPAARQLVNHGHITVN
GRVVNIASYQCRPGEVIAVKDKEASRKLVETNLQYPGLANLPSHLEFDKNKLVGKVNGII
EREWVALQVNELLVVEYYSRQA
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgatatagagggcctcgcctcagaattgtacgtcgcttgggcgacttaccagga
ttaactcgtaaaagcgctagacgcgcttatccacctggtcagcatggtcagaaccgtaaa
aagcgttctgagtatgctatccgtctggaagaaaagcaaaagctgcgcttaaactacggt
ttgaccgaaaagcaactgctacgctatgtccgtaaagccagacgtgttactggttctacc
ggacaagcgctgttgcaattactggaaatgcgcctggataatacagttttccgcttgggt
ttagctccgactattcccgcagcgcgtcaactcgtcaatcacggtcatatcactgtgaat
ggacgtgtagttaatattgctagctatcagtgccgtcctggtgaagtcatcgctgtcaag
gataaagaagcatcgcggaagttggtagaaaccaacctccaatatcctggactagctaac
cttcccagccatctggaatttgacaaaaacaagctggttggtaaagtcaacggtattatt
gagcgagaatgggtggctctacaagttaacgaactgctcgtggtggaatactactcacga
caagcgtaa
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