Calothrix sp. NIES-2098: NIES2098_48440
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Entry
NIES2098_48440 CDS
T08374
Name
(GenBank) RNA-binding S1 domain-containing protein
KO
K06959
protein Tex
Organism
caln
Calothrix sp. NIES-2098
Brite
KEGG Orthology (KO) [BR:
caln00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
NIES2098_48440
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GFIT
Motif
Pfam:
Tex_YqgF
Tex_N
HHH_3
HHH_9
Tex_central_region
S1
YqgF
HHH_7
S1_RRP5
T2SSK
OB_RRP5_4th
baeRF_family10
SpoVAE
HHH
DUF7645
Motif
Other DBs
NCBI-ProteinID:
BAY11659
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Position
5804213..5806372
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AA seq
719 aa
AA seq
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MLNIPQLLATELNLKPFQVQNALELFAEGATIPFIARYRKERTGEMDEVQLRDLSDRYSY
LTELEERKAVILNAIANQGKLTDELKEQIISCLQKTELEDLYLPYRPKRRTRATIAREKG
LEPLADFIKSLNVKNPVSASIETEAAKYISETQGIKSAEEALKGAADILAEEVAEKAESR
AYIRDYLLESGIFTSRIKDEHPEGTTKFEMYRNYQAKVKNIAPHNILALCRGEAEGILNF
EITFDEDVVLSYLESKEIKTKVRAIRDFYQAMLKDAFNRLMKASLMGEVITEKKTYADIE
SIKTFETNLRELLLSAPAGMKPTLAIDPGFRTGCKVAVLDQTGKFLEYQAVFPHQAAEQR
TKAAQTIKNLIEKYKIELIAIGNGTASRETDEFVSQVLQAIERKPVKVMVNESGASIYSA
SKVALEEFPHLDVTVRGAISIGRRLQDPLAELVKIDPKSIGVGQYQHDVDQKLLKKKLDE
TVESCVNYVGVDLNTASKELLTFVSGITPAVANNIVTYRNENGAFKNRRQLLKVPKLGPK
AFEQAAGFLRIRNGENPLDNTAVHPESYSLVEAIASDLNVPLNQVTQIAAKLQKTNLKKY
ITDTVGEPTLRDILSELEKPGRDPRAEFKYATFKEGITEIKDLQVGMELEGIITNVANFG
AFVDIGVHQDGLVHISQLADRFVDDPKKIVKVGQVVKVRVLEVNEKLKRISLSMKSVRQ
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacattcctcaactactggcaactgaactaaaccttaaaccctttcaggtgcaa
aatgcgctggaactattcgcagaaggtgcaacaattccttttatcgcacgttaccgtaaa
gagcgcaccggcgaaatggatgaagttcaactacgggacttatccgataggtatagttac
ttaactgaattagaagaaagaaaagcggtaattttaaatgcgatcgccaaccaaggtaaa
ctcactgatgaactgaaagagcagattatttcttgcttacaaaaaaccgagcttgaggat
ttatacttaccctatcgacccaagcgacgcacccgtgcaactatcgctagagagaaaggt
ttagaaccactggcagattttattaaatcgctcaatgtgaaaaatcctgtctctgcttca
atagaaacagaagcagcaaagtatatttcggaaactcaaggaattaaatctgctgaagaa
gcgttgaaaggtgcggctgacattttagcggaggaagtggcagagaaagccgaatctaga
gcatatatccgcgattatcttttagaatcggggatatttacctcgcggataaaagatgag
catcccgaaggtacaacgaaatttgaaatgtaccgcaactatcaagctaaagtgaaaaat
attgcaccgcataatattttggcgttgtgtcggggtgaagccgagggaatattaaatttt
gaaattacctttgatgaggatgtagtactttcctatttagaatcaaaggaaatcaaaacc
aaagtccgcgctattcgagatttttatcaggcgatgctgaaagatgcatttaatcgcttg
atgaaagcttctttaatgggagaagtaataacagaaaagaaaacctacgctgatattgag
tcgattaaaacctttgaaactaatttaagagaattattactatctgcaccagcaggaatg
aaaccaaccttagcaatagatcctggttttagaactgggtgtaaagtagcagtattagac
caaactggtaaattcttggaataccaagcggtgtttccccatcaagcagcagaacaacgg
actaaagctgcgcaaactatcaaaaatttgattgaaaaatacaaaatagaattgattgca
attggtaacggtacagcttctcgtgagactgatgaatttgtctcgcaggtactgcaagct
atagaacgcaaaccagttaaggtaatggtaaatgaatcgggtgcatcgatatattctgct
agtaaagtcgcattagaagagtttccccatttagatgtcaccgtgcgcggtgctattagc
attggtcgccgtttgcaagaccctttagcagaattagtgaaaatcgatccgaaatcgatt
ggtgtgggacaatatcaacacgatgttgaccaaaagctgctgaagaaaaagttagatgaa
actgtagaaagctgcgttaactatgtaggtgtggacttaaatacagcttctaaagaactt
ttgacctttgtttcgggaattacgccagcagttgccaataatattgttacttatcgcaac
gagaatggagcctttaaaaatcgccgccaactgttaaaagtaccaaaactagggccaaaa
gcctttgaacaagcagctgggttcttgcgcatacgtaacggcgaaaaccctttggataat
acagccgtgcatccagagagttactctttagtagaagcgatcgcatccgacctcaacgta
ccattaaatcaggtgacacaaattgctgccaaactgcaaaaaaccaacctgaaaaaatac
atcaccgataccgtaggcgaaccaacactgcgcgacatcctcagcgaactcgaaaaacct
ggtagagatccccgtgctgagtttaagtatgccaccttcaaagaaggaattaccgaaatc
aaggatttgcaagtcgggatggaattagaaggtatcatcaccaacgttgcgaactttggc
gcatttgttgatatcggcgtccatcaggatggcttagtgcatatctctcaacttgctgat
agatttgttgacgatcccaaaaagattgtcaaagtcggacaagtggtgaaagttagagtg
ttggaagtgaatgagaagctgaagcgaattagtttgtcgatgaagtctgtgagacagtaa
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