Calothrix sp. NIES-2098: NIES2098_50610
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Entry
NIES2098_50610 CDS
T08374
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
caln
Calothrix sp. NIES-2098
Brite
KEGG Orthology (KO) [BR:
caln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caln03032
]
NIES2098_50610
03036 Chromosome and associated proteins [BR:
caln03036
]
NIES2098_50610
03400 DNA repair and recombination proteins [BR:
caln03400
]
NIES2098_50610
DNA replication proteins [BR:
caln03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NIES2098_50610
Chromosome and associated proteins [BR:
caln03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
NIES2098_50610
DNA repair and recombination proteins [BR:
caln03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
NIES2098_50610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
DUF2267
Transposase_mut
Pox_C4_C10
Motif
Other DBs
NCBI-ProteinID:
BAY11875
LinkDB
All DBs
Position
complement(6074050..6074334)
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AA seq
94 aa
AA seq
DB search
MNKGELVDAVAEKASVTKKQADAVLTAALETIIEAVSSGDKVTLVGFGSFESRERKAREG
RNPKTNEKMEIPATKVPAFSAGKLFREKVAPPKS
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaggcgaattagttgatgctgtagctgaaaaggctagtgtaaccaaaaagcaa
gcagacgctgttctgactgcggctttggaaacgatcattgaagctgtttcctctggcgat
aaggtaacgctggtaggatttggttcttttgaatcacgggaacgtaaagcccgtgaaggt
cgtaaccccaaaaccaatgagaagatggaaattcctgctaccaaggttcctgcgttctct
gctggtaagttgtttagggagaaggttgcacccccaaaatcgtag
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