Calothrix sp. NIES-2098: NIES2098_51020
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Entry
NIES2098_51020 CDS
T08374
Name
(GenBank) TROVE domain-containing protein
KO
K11089
60 kDa SS-A/Ro ribonucleoprotein
Organism
caln
Calothrix sp. NIES-2098
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
vWA_Ro60
TROVE
DUF2201
Motif
Other DBs
NCBI-ProteinID:
BAY11916
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Position
complement(6132071..6133675)
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AA seq
534 aa
AA seq
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MNYNFFTKKQTNTPQNQPIPGREAEMIKGRSGGYMFDAGIWKMLRRCLLIGTAKSTYYAG
KHELTEDFVDVVKQAVAENPGRVAEEILYASDGRAINNSAPILALVLLSMGETPEAKKAF
GEIFGQVVRTGSHFYEWLNYTKSLRGFGKVVREAGKTWLSREDVKGLAYQLLKYQQRQGF
SHKDALRLFHVKPPTETHRELFEWVVKGWEDLPADIPSEALAQIWWYEWLKRNPSETHTA
IAQGRLTHEMAAPVGKMDKQAWQLLFQEMPIGAMLRNLGSLTELGVLRADESANILRVEA
VLNNKEHLRKGRIHPIDVLKALKTYQSGGKLGRSQKTWEPVPRIVDILEKAVELAFDVVQ
PTGKVFMHAVDVSGSMSWGVVDSVGLSCCEIATTMALVTAKAEQNYMIRGFATEFRELGI
TAKDSFSSALRKASNQNFGGTDASVAYDWMIKNKFKADVICFWTDNESWAGSKHPSQALA
QYRQKVNPNAKAVYVTLAPYKITLVDPQDPLSWDLAGFDPGTPRIIQMLATGEL
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgaattacaatttctttactaaaaagcagaccaatacaccgcaaaatcagcctatcccc
ggacgagaagcagagatgattaaggggcgttccggcgggtatatgtttgatgcgggtatt
tggaaaatgctgcgccgttgtctgttgattggcacagcaaaaagcacttactatgcgggc
aaacatgaattaactgaagattttgtagatgttgttaaacaagctgtagcagaaaatcct
gggcgtgtggcagaagaaattctctatgctagcgatggacgcgccattaacaacagtgcg
cctatcttggcattggtgctgctatctatgggtgaaacaccagaagccaaaaaagccttt
ggtgaaatctttgggcaagttgttcgcactggtagccacttctacgaatggctgaactac
accaaatctctgcggggatttggtaaggtagtgcgcgaagctgggaaaacttggttatct
cgcgaagatgtcaagggtttagcttatcaacttttgaaatatcaacagcgtcaaggtttc
tctcacaaagatgcattgcggttgttccatgtcaaaccacctacagaaactcaccgcgaa
ttatttgagtgggtagttaaaggttgggaagatttgccggcagacataccttctgaggca
ttggcgcagatttggtggtatgagtggttaaagcggaatcctagcgaaacccatacagcg
atcgcacaaggacgcctaactcacgaaatggctgcacctgtgggtaagatggataaacaa
gcttggcagttgcttttccaagaaatgccaataggtgcaatgctgcgtaaccttggttct
ttgacagaactgggtgtactgcgagctgatgaaagtgccaatattctgcgagtggaagca
gttctcaacaacaaagaacatctgcgtaaaggtcgcatccatccgattgatgttttgaaa
gccctgaagacttatcaatctggtggcaaattaggacgcagccaaaaaacttgggaacca
gtacctcggattgtagacatcttagaaaaagcggttgaactagcttttgatgttgtgcag
cccacaggtaaagtgttcatgcacgctgtagatgtttccgggtcgatgtcttggggtgta
gttgattcagtaggtttaagctgctgcgaaattgccacgacaatggcgctggtgacagca
aaagccgagcaaaactatatgattcgcggctttgctaccgaatttcgcgaattaggtatc
acagctaaagatagttttagttctgcactacgcaaagctagcaatcaaaacttcggtgga
acagatgcgtctgtagcttacgattggatgattaagaataagttcaaggcagatgtaatt
tgcttttggactgataacgagtcatgggctggttctaagcatcccagtcaagcattagcg
cagtatcgccagaaggtaaaccccaatgccaaggcagtgtatgtcactcttgcaccttac
aaaattaccttagtagatcctcaagatccgctttcttgggatttagctggattcgaccca
ggaacacctcgcatcatccagatgctagctacaggtgaactctaa
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