Calothrix sp. NIES-2098: NIES2098_51210
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Entry
NIES2098_51210 CDS
T08374
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
caln
Calothrix sp. NIES-2098
Brite
KEGG Orthology (KO) [BR:
caln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
caln03016
]
NIES2098_51210
Enzymes [BR:
caln01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
NIES2098_51210
Transfer RNA biogenesis [BR:
caln03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
NIES2098_51210
Prokaryotic type
NIES2098_51210
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
BAY11935
LinkDB
All DBs
Position
6157957..6158916
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AA seq
319 aa
AA seq
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MQITFLGTSSGVPTRARNVSSVALRLPQRAELWLFDCGEGTQHQLLRSDLKISQLSRIFI
THMHGDHIFGLMGLLASCGLAGNVERVDIYGPPGLNEYIQAASRYSHTHFSYPIKVHAIR
PGVIYEDDEFTVTCGHLHHRITAFGYRVAEKDRAGRFDVEKAKELQIPPGRVYGQLKRGE
TVTLSDGRVINGKDLCGPTEIGRKIAYCTDTVYCEGAVELAQDVDVLIHEATFAHQDADM
AFQRLHSTSTMAAQTALVAKAHRLIMTHFSPRYAPGNTLELRDLLQEARAIFPNTDMAHD
FMVYDVPRRRELELTKTGV
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
gtgcagatcacatttttagggacaagttctggtgtacccacaagagcacgcaatgtttcc
agcgtcgccctgagactaccccaaagggcggagttgtggttattcgattgtggcgaaggt
actcagcatcaacttttgcggagcgacctgaaaatcagccaactatcccgaatttttatt
actcatatgcacggcgaccacatctttggcttgatgggactgctggcaagttgtgggctg
gctggtaatgtggaacgagttgatatttatggcccgcctggattaaatgaatatatccaa
gctgcctcacgttactcccatactcacttttcttatcctataaaagttcatgccattcgt
ccgggggtaatttatgaagatgatgagttcacagttacttgtggacatttacatcaccga
attacagcctttggttatcgtgttgcggaaaaagaccgagcaggacgctttgatgtagaa
aaagccaaagagttgcaaattccgcctggtcgagtttacggtcaactcaagcgtggtgaa
actgtaactctgagtgatgggcgagtaattaatggcaaagatttgtgcggacctacagaa
attgggcgcaaaattgcctattgtacagacacagtttattgtgaaggtgcggtggaatta
gcacaggatgtagatgtattaattcacgaggcaacttttgcgcatcaagatgcagatatg
gcttttcaacggctacattccaccagcacaatggcagcacaaacagctttagttgctaaa
gcacatcgcttaatcatgactcatttcagcccccgctatgctccaggaaatactttagaa
ctgagagatttacttcaggaagctagagcaattttccccaataccgatatggctcatgat
ttcatggtttatgatgtaccaaggcgacgggagttagaattaaccaagacaggtgtataa
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