Calothrix sp. NIES-2098: NIES2098_53590
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Entry
NIES2098_53590 CDS
T08374
Name
(GenBank) alpha amylase catalytic region
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
caln
Calothrix sp. NIES-2098
Pathway
caln00500
Starch and sucrose metabolism
caln01100
Metabolic pathways
caln01110
Biosynthesis of secondary metabolites
Module
caln_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
caln_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
caln00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
NIES2098_53590
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
caln04147
]
NIES2098_53590
Enzymes [BR:
caln01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
NIES2098_53590
Exosome [BR:
caln04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
NIES2098_53590
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
AMPK1_CBM
Alpha-amylase_C
GlgB_N
Malt_amylase_C
X25_BaPul_like
CBM53
DUF3459
GHL6
Motif
Other DBs
NCBI-ProteinID:
BAY12172
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Position
complement(6455552..6457210)
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AA seq
552 aa
AA seq
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MASPIEFNLFAPYNKAVSLIASFSDWQEIPMEKGEDGYFRATVDLEDGTYEYKFRVQSKS
WFFEEDQSVDVTDPYATDIDGMSASENSIVRIKDGERIVDTYVWHHDDKPLPADHELVIY
ELHVADFSGGEDDPKLRGKYKHVIEKLDYLCDLGINAIELMPVKEYPGDYSWGYNPRHFL
ATESSYGSTADLKHLIDECHARGIRVLMDGIYNHSEASAPLTQIDHDYWYHHEPRDPDNN
WGPEFNYEHYDENLDIYPARKFIGDTVRYWIEEYHIDGIRYDAARQIANYDFMHWIVQEA
KQTAGSKPFYNVAEHIPETPSITNVDGPMDGCWHDSFYHCVLEHIAGDTFDLERLKDVLD
CKRQGFMGATNVVNYLTNHDHNHVMADLGDRDILGEEAFRRIKLGVVLLMTAVGVPLIWM
GEEFGEFKYKTTEQAKIDWTLLAGDDNRGLFEYYKGLIALRKQNHALYTENINFFHENPE
SQVIAYTRWNGEGSRVVVVANFSNEFLAGYTIPDFPENGTWHEWTGNYDVEAGDNSLMTD
LGPFEAKVFVWQ
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggctagtcctatagaatttaatttgtttgctccttataacaaagccgtatcattaatt
gcttctttttctgattggcaagaaatcccaatggaaaagggtgaagatggttattttcgc
gccactgtagatttagaagatggcacttacgaatataagtttcgcgtccagtccaaaagc
tggttttttgaagaagaccagtcggtagatgttactgacccttatgctaccgatattgat
ggcatgagcgctagtgaaaatagcattgtgcggattaaggatggtgaaagaattgttgat
acctatgtttggcaccatgatgataaacctttaccggctgaccatgaattagttatctac
gaattacacgttgcagatttttctggcggggaagatgaccccaaactgcgcggtaaatac
aagcatgtgattgagaagctagattatctctgcgatttgggaattaatgccattgaacta
atgccagtcaaagagtatcctggcgattacagttggggttataatcctcggcatttctta
gctacagaatctagttatggttctaccgcagatttgaaacatttaatcgatgagtgtcat
gccagaggaattcgggtattgatggatgggatttataaccattccgaagcgtccgcaccg
ttaactcaaatagaccacgattattggtatcaccacgaaccccgcgatcctgataataac
tgggggccggagtttaattacgaacactacgacgaaaatctcgatatctacccagcacgc
aaatttattggcgatacagtgcgttactggattgaggagtaccacattgacggtattcgt
tacgatgcagcaaggcaaatcgccaattatgattttatgcattggatagtgcaggaagcc
aagcaaactgctggcagcaaacccttttacaatgttgccgaacacatccccgaaacacct
agcattaccaatgttgatggcccgatggatggttgctggcatgatagcttttatcattgc
gttctagagcatattgctggagatacatttgatttagaacgcctcaaagacgtgctggac
tgcaagcgccaaggctttatgggtgcaaccaatgtagttaactacctcaccaaccacgac
cacaatcatgtgatggccgatttaggcgatcgcgacattttaggagaagaagctttccgc
cgcatcaagttgggtgtagttctgttgatgactgcggtaggcgttcctctaatttggatg
ggtgaagagtttggtgagttcaaatataaaactaccgagcaagcaaaaattgattggaca
ttgctagctggtgacgataatcgtggcttatttgaatattacaaaggtttaatcgctctg
cgcaaacaaaatcatgctttgtacacggaaaatattaactttttccatgaaaatccagaa
tctcaagtcatagcatatacccgttggaatggtgaaggttcgcgtgtagtagtcgttgcc
aatttttctaatgaatttttggcaggatatacaattcccgactttccagaaaatggtact
tggcacgaatggacgggtaattatgatgtcgaagctggtgataactccttgatgactgat
ttaggcccgtttgaagctaaggtatttgtctggcaataa
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