Calothrix sp. NIES-2098: NIES2098_55380
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Entry
NIES2098_55380 CDS
T08374
Name
(GenBank) radical SAM domain-containing protein
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
caln
Calothrix sp. NIES-2098
Brite
KEGG Orthology (KO) [BR:
caln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
caln03009
]
NIES2098_55380
Enzymes [BR:
caln01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
NIES2098_55380
Ribosome biogenesis [BR:
caln03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NIES2098_55380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
RlmN_N
Fer4_12
Radical_SAM_2
Motif
Other DBs
NCBI-ProteinID:
BAY12350
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All DBs
Position
complement(6676013..6677083)
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AA seq
356 aa
AA seq
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MSATPLISPANSLNSQQLENIPPLLGASVAELTAWVQQQGQPAYRGKQLHDWIYHKGVRS
LADISVFSKQWRAEVAEIPIGRSTIHHRAVAPDGTIKYLLQLADGQIVETVGIPSDKRLT
VCVSTQVGCPMACDFCATGKGGYKRNLARHEIVDQVLTVQEDFQQRVSHVVFMGMGEPLL
NTENVLAALRSLNQDVGIGQRSLTVSTVGIRDRIRQLAQHHLQITLAVSLHAPNQALREQ
LIPSARPYPIEDLLAECREYVEITGRRVSFEYILLAGVNDLPEHALELAKRLRGFQSHVN
LIPYNPIQEVDYKRPNSDRIQAFVKVLKQQQIAVSVRYSRGLEADAACGQLRASKN
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccacgccgctgatttctccagctaactcactaaactcccaacagttagaaaat
atccctcccttattaggtgcttccgttgctgaattgactgcttgggtgcagcaacaggga
cagccagcttatcgaggtaagcagctacatgattggatatatcacaagggagtgcgatcg
ctagctgatatttctgtattctcaaaacaatggcgtgcggaagtcgcagaaattcccatc
ggacgttcaactatacaccaccgcgctgttgcacctgatggcactatcaagtatctcttg
caacttgcagatggacaaatcgtagaaactgttggtattcccagtgataaacgtttaact
gtctgtgtttctactcaggtgggttgtccgatggcttgtgatttctgcgccactggtaaa
ggcggttacaagcgtaacttagcacgtcatgaaattgtcgatcaggtgttgacggtacaa
gaagattttcagcaacgggtaagccatgtagtatttatgggcatgggtgaaccgttgtta
aatactgagaatgtcctagcagctttaagatccttaaatcaagatgtgggaattggacag
cgatcgctcactgtctctacagtaggaatacgcgatcgcattcgtcagttagcccaacac
catttacaaattactctggctgttagccttcatgcgcccaaccaagcactgcgagaacaa
ttgattcccagcgcgcgtccctatcccattgaagatttgctggctgaatgtcgggaatat
gtggaaatcactggccgccgcgttagttttgagtatatcctcctggctggagtcaacgat
ttaccagaacacgctttggaactagcaaaacgcttgcggggtttccaaagccacgtgaat
ttaattccttataaccccattcaagaagtagattataaacgcccaaatagcgatcgcatt
caagccttcgttaaagtcctcaagcagcaacaaattgctgtcagcgtccgttactcccgc
ggtttagaagctgatgcagcttgcggacaacttagagcaagtaaaaattaa
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