Calothrix sp. NIES-2098: NIES2098_57320
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Entry
NIES2098_57320 CDS
T08374
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
caln
Calothrix sp. NIES-2098
Brite
KEGG Orthology (KO) [BR:
caln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
caln03016
]
NIES2098_57320
Transfer RNA biogenesis [BR:
caln03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
NIES2098_57320
Prokaryotic type
Methyltransferases
NIES2098_57320
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
GTP_EFTU
MMR_HSR1_Xtn
Ras
RsgA_GTPase
Roc
AIG1
Dynamin_N
cobW
NOG1
Motif
Other DBs
NCBI-ProteinID:
BAY12544
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Position
6913512..6914906
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AA seq
464 aa
AA seq
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MSEIFATTGTIAAIATAVVPQQGSVGIVRVSGSQAIAIAKTLFHAPGRQVWESHRILYGY
IRHPKTQKLVDEALLLIMQSPRSYTREDVVEFHCHGGIMAVQQVLQLCLENGARLAQPGE
FTLRAFLNGRLDLTQAEGIADLVGARSPQAAQTALAGLQGKLAHPIRQLRANCLDILAEI
EARIDFEEDLPPLDDKAIISAIENIAAEITKLLATKDKGELLRTGLKVAIVGRPNVGKSS
LLNAWSRSDRAIVTDLPGTTRDVVESQLVVGGIPVQVLDTAGIRETTDQVEKIGVERSRR
AASAADLVLLTIDAAAGWTEGDREIYEQVQHRPLILVINKIDLVKESVKNSLQSKTLNFK
HQIFTAAAQNLGIEDLETAILEIVQAGKVHAADLDLAINQRQAAALTKAKISLEQVQYTI
TQQLPLDFWTIDLRDAVYALGEITGEEVTESVLDRIFSRFCIGK
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaatatttgccactactggaaccatcgccgcgatcgcaactgctgttgtcccg
caacagggtagcgtgggtattgtgcgggtatctggttcccaagcgatcgcgatcgccaaa
acgctctttcatgcacctgggcgtcaggtttgggaaagtcaccgcattctctacggctac
atccgtcacccgaagacacaaaagttggtggatgaagctttgttgttgattatgcaatca
ccccgttcttacacccgtgaagatgtggtggaattccattgtcacggcggaattatggca
gtgcagcaggtgttgcaattatgtttggaaaatggcgcaagactggcacagccaggagaa
tttacactccgtgcctttttgaatgggcgattagatttgacacaagccgaaggtattgct
gatttggtgggagcgcgatcgccgcaagctgctcaaactgctttagctggtttacaaggt
aaattagctcatccaattcgccagttacgcgctaactgtttggatattttggcagaaatc
gaagcgcggatcgattttgaggaagacttacctccgctggatgataaagctataatatca
gcaattgagaacattgccgcagaaattactaagttattagcaactaaagacaaaggcgaa
ctgttacgcacaggtttaaaagtagcaattgttgggcgaccaaatgtagggaaatcaagc
ttgctgaacgcttggagcaggagcgatcgcgccatcgtcaccgatttacctggaaccacc
cgcgatgttgtggaatcgcagttagttgtcggtggtattcccgtgcaggtgctagatact
gcggggattcgcgaaaccacagaccaggtagaaaaaattggcgtcgagcgatcgcgccgt
gctgccagtgcagccgatctagtgctgttaaccattgatgctgccgcaggttggacggaa
ggcgatcgggaaatttacgaacaggtacaacaccgtccattgattttagtaattaacaaa
attgatttagtaaaagaaagcgtaaaaaattctctgcaatcgaaaaccctaaattttaaa
catcaaatttttaccgcagcagcacagaacctaggtattgaagatttagaaacagcaatt
ttagagatagtgcaagctggtaaagttcatgctgccgatctagatttagcaattaaccaa
agacaagcagcagccttaacaaaagccaagatttctctagagcaagtgcagtatacaatt
actcaacaactacctctcgacttttggacaattgatttacgagatgcagtttatgcatta
ggagaaattacaggtgaagaagttacagaatcagtgcttgacagaatttttagtagattc
tgtattggcaaataa
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