Calothrix sp. NIES-2098: NIES2098_62830
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Entry
NIES2098_62830 CDS
T08374
Name
(GenBank) periplasmic binding protein/LacI transcriptional regulator
KO
K10439
ribose transport system substrate-binding protein
Organism
caln
Calothrix sp. NIES-2098
Pathway
caln02010
ABC transporters
caln02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
caln00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NIES2098_62830
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
NIES2098_62830
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
caln02000
]
NIES2098_62830
Transporters [BR:
caln02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
NIES2098_62830
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
GSH-S_ATP
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
BAY13090
LinkDB
All DBs
Position
complement(7530319..7531347)
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AA seq
342 aa
AA seq
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MKRIAIAASILGILSGTLIGCSNGAQNDKTATNTDTNTTTKTASNTSAQTNTATGDKKLR
SVAFTAGDLSNPFFVLMGKEIEAEAKRIGGNDVKVSVVSSAYDLNQQANQIENFTASNTD
VIILNAADKTGIKPAVEKAKQAGRIVVAVDTGAEGVDATVTTNNVQAGEVACKYIADRLK
GKGDVVIVNGPQVESVIQRVNGCENVLSKYPGIKILSKNQNAEGSRDGGLRVMTDLLTTF
PKIDAVFAINDPSGVGAELAATQAQRKEFFIVGVDGAPEAIKAIANKDGIYAATATQNPR
GMAKEAVDVGNNILHGKKPANSTILIPVKLITKDNVATEQGW
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacgaattgcgatcgcagctagcatattaggcattcttagcggtactttgattggt
tgctcaaatggcgctcaaaatgacaagactgctactaacacggatactaacacaaccacc
aaaactgctagcaatactagcgcccagactaatactgccactggggataagaaattacgc
tcggtggctttcacggctggcgatttgagtaacccctttttcgtcctgatgggcaaggaa
attgaggcagaagccaagagaattggcggtaatgatgtcaaggtgagtgtggtttccagc
gcctatgacctcaaccaacaagctaatcaaattgaaaattttacagcttccaatactgac
gtaattatcctgaatgctgccgataaaactggcattaagccagcagtagaaaaagccaag
caagcaggtagaatcgtagttgcagtagatacaggtgcagaaggcgtagatgccaccgtt
actactaataacgtgcaagcgggagaagttgcttgtaaatatattgccgatcgactcaaa
ggcaaaggtgatgtcgtcatcgtcaacgggccgcaggtagagtcggtaatccaacgggtt
aatggctgcgagaatgtattgtccaaatatcccggtattaaaatcctctcgaaaaaccag
aatgcagaaggcagtcgagacggcggactgagggtgatgacagacttgctgacaaccttc
ccgaagatagatgcggtatttgccattaacgaccccagtggagtgggagcagaattagca
gctacccaagcacaacgtaaagagttctttattgttggggtcgatggtgcgccagaagca
atcaaagcgatcgccaataaagatggtatatatgcagcaactgctactcaaaatcctaga
ggcatggctaaagaagcagttgatgtgggcaataacatcttgcatggtaagaaaccagct
aattccaccattctgattccagtcaagctgatcaccaaagacaacgtcgcaactgaacaa
ggctggtag
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