Calothrix sp. NIES-2098: NIES2098_64120
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Entry
NIES2098_64120 CDS
T08374
Name
(GenBank) SNF2-related helicase
Organism
caln
Calothrix sp. NIES-2098
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
ResIII
DEAD
ERCC3_RAD25_C
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
BAY13217
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Position
7673430..7676666
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AA seq
1078 aa
AA seq
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MAILHGIWLSKKQNSCLFIWGETWRSSQVNLDSNADFDIPSHPLAMAPQELSEWLHSRNL
KIANFIQQPQVAVSAGRKRQSISVTEVNLPGASQIIGLPTQISDSSILPIHSAVVETQFI
PIQKTDSTSYIHPWRIEGFCLNPAAAMKFLSSLPLSTINGEDVFLGGDLRFWSQVARWSL
DLISRCKFLPTIQKQSDSSIDARWQVLLDSAVDGTRLEKFSQLMPLACRTYQKPLENEEL
TASQIYIDLPLQPQELLLGFLNSTIDTQVREMVGSQSPIESRVMASLPAAVRQWLQALIS
ESQTVSADPIGLERLQAALTAWTMPLQYQLTHKALFRTCFELRSPEAGESEWKLVYYLQA
ADDPEFLVDAATIWQHPVEQLTYQNRTIAEPQETFLRGLGLASRLYGGIAPSLESDYPES
CSLNPMQAYEFIKSVAWRFEDSGLGVVLPPSLANREGWANRLGLKITAETPNQKQGRLGL
QSLLNFQWQLAIGGQTISKAQFDRLVALNSPLVEINGEWVELRSQDIKTAQAFFASRKEK
MALSLEDALRLSTGDTQAIEKLPVVSFEASGALQELIGALTNNQAIAPLPTPANFKGQLR
PYQERGAAWLAFLERWGLGACLADDMGLGKTIQFIAFLLHLKEQDALEKPTLLVCPTSVL
GNWEREVKKFAPTLKILQYHGDKRPKGKTFTETVKKYDLVVTSYSLIHRDIKSLQSVDWQ
TIVLDEAQNVKNSDAKQSQAVRQLETTFRIALTGTPVENRLQELWSILDFLNPGYLGNKQ
FFQRRFAMPIEKYGDSASLNQLRSLVQPFILRRLKTDRDIIQDLPEKQEMTVFCGLTPEQ
ATLYQKVVEDSLAEIDTATGLQRRGMILALLIKLKQVCNHPAQYLKESTLDKYHSAKLQR
LDEMLEEALSEGDRALIFTQFAEWGKLLKPHLEKQLGREIFFLYGSTSKKQREEMIDRFQ
HDPQGPPIMILSLKAGGVGLNLTRANHVFHFDRWWNPAVENQATDRVFRIGQTRNVQVHK
FVCTGTLEEKIHDMIESKKQLAEQVVGAGEDWLTELDTDQLRNLLLLDRSSVIEEDEG
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atggcgattttacacggtatttggttaagtaaaaagcaaaatagttgtttatttatttgg
ggagaaacttggcgttcttcacaagttaatcttgattctaatgctgattttgatatacca
tcacatccattggcaatggcaccacaggagttaagcgagtggttgcattctcgaaatctg
aaaattgctaactttatccaacaaccgcaagtagctgtaagtgcaggaagaaaacgtcaa
agtataagtgttactgaagtaaatttgccgggagcatcccaaatcattggtttaccaact
caaatatcagacagcagcattttgccgatacattctgctgtagtcgaaacacaatttatt
cctatacaaaaaacagactctacatcatatatccacccttggcgaattgagggtttttgt
ttaaatcctgccgcagcaatgaaatttctttcttctcttcctttaagtacgattaacggg
gaagatgtttttttaggcggagatttacgcttttggtcgcaggttgcccgttggagttta
gatttaatttctcggtgtaagtttttaccaacaattcaaaaacaatctgatagttcgata
gatgctaggtggcaagtacttttggatagtgctgtagatggcacaagattggaaaaattt
tctcagttgatgccattagcttgccgcacttatcagaaaccgctggagaatgaagaatta
actgcatcccaaatatatatagatttaccgctacaaccgcaagaattactgttaggattt
ctcaacagtacgatagatactcaagtccgagaaatggtaggttcccaatccccaattgaa
agtagggtgatggcatctttaccagcagcggtgcgtcagtggttgcaagctttaattagt
gaatctcaaacagttagtgcagatcctattggcttagaaagattacaagcggcactaaca
gcttggacgatgccgctacaataccaattaactcataaagctctatttcgtacttgtttt
gaattgcgatcgcctgaggctggagaatcagaatggaaattggtatattatctccaagct
gcggacgatccagagtttttggtagatgcggccactatttggcaacacccagttgagcaa
ttaacatatcaaaatcgcaccatcgcagaaccccaagaaacttttctgcgcggcttgggg
ttagcttcccgattgtatggaggaattgcacccagtttagaaagtgactatcctgaatct
tgtagtcttaaccccatgcaggcttatgaatttattaagtctgtagcttggagatttgaa
gatagtggtttaggggtagttttaccgcctagtttggcaaaccgtgaaggatgggcgaac
cgtttgggtttgaaaattactgcggaaacgccaaatcaaaagcaagggcgcttaggattg
cagagtttgctgaattttcagtggcaattggcgattggtgggcaaacaatttctaaagct
cagtttgacaggctggtagcattaaatagcccactagtagaaattaacggtgagtgggtg
gagttacgatcccaagatattaagacagcgcaagccttttttgcttcccgtaaagaaaaa
atggcgctttccttggaagacgctttgcgcttgagtacaggggatacccaggcaattgaa
aaattaccagtagtcagttttgaagcatctggtgcattacaagagttaatcggggcgctg
acaaataatcaggcgatcgcacctttacccacacccgccaactttaaaggacagttgcga
ccttatcaagagcgaggtgcagcttggctagctttcttagaacgttggggtttgggtgct
tgtcttgcagacgatatgggtttagggaaaaccatccagttcatcgcttttcttttacat
ttgaaagaacaggatgcactagaaaaacctactctactagtttgtcctacttctgtatta
ggaaactgggaacgggaagttaaaaaatttgctcctacactcaaaattttacagtatcac
ggtgataaacgccccaaaggtaagacgtttacagaaaccgtgaaaaagtatgatttagtt
gtaactagttactcactgattcaccgagatatcaaatcattgcagagtgttgattggcaa
acaatagtgttagatgaagcacagaatgttaaaaattctgatgccaagcaatcacaagca
gttagacaattagaaacaacatttcgtattgctttaactggtacaccagtagaaaataga
ttgcaagaattatggtctattttagattttctcaatcctggttatttgggcaataagcag
ttttttcaaaggcgatttgccatgccgattgaaaagtatggcgattctgcttcattaaat
caattgcgttcattagtacaaccatttattctgcggcgactgaagacagatcgtgatatt
attcaagacttgccagaaaagcaggaaatgacggtattttgtggacttactcccgaacaa
gccacgctttatcaaaaagtggtggaagattctttagcagagattgacactgccacagga
ttacaacgccgaggtatgattttagctttattaatcaagctcaaacaagtctgcaatcat
ccagcccaatatttaaaagaaagcacattagataaatatcattcagccaaacttcagcgt
ttggatgaaatgctagaagaagctttatcggaaggcgatcgcgctttaatcttcactcaa
tttgcggaatggggtaagttactcaaaccccatttagaaaaacagttagggcgagaaata
tttttcttgtatggtagcactagtaaaaaacaacgtgaggaaatgatcgaccgtttccaa
cacgacccccaagggccaccaattatgattctttccttaaaagctgggggtgtggggttg
aatttaacgagagcaaatcatgttttccactttgatagatggtggaaccccgcagtcgaa
aatcaagctacagaccgagtatttcggattggtcaaacccgcaatgtccaagtccacaaa
tttgtctgcactggcacattagaagagaaaattcacgatatgattgaaagtaaaaaacaa
cttgcagaacaagttgtaggtgctggagaagattggttaactgaactagatacagaccaa
ctccgcaatttacttttactcgatcgcagttctgtcattgaagaggatgaaggataa
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