Calothrix sp. NIES-2098: NIES2098_65260
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Entry
NIES2098_65260 CDS
T08374
Name
(GenBank) DNA mismatch repair protein
KO
K03555
DNA mismatch repair protein MutS
Organism
caln
Calothrix sp. NIES-2098
Pathway
caln03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
caln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NIES2098_65260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caln03400
]
NIES2098_65260
DNA repair and recombination proteins [BR:
caln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
NIES2098_65260
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
nSTAND_NTPase5
T3SS_SCTL
Motif
Other DBs
NCBI-ProteinID:
BAY13331
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Position
complement(7817693..7820263)
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AA seq
856 aa
AA seq
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MTASDFDIQPTEPNDPSAPHSDTRLVDRSKLSKMYQHYVEVKDKYPHALLLYRVGDFFET
FFQDAVTVSRELELVLTSKHGGEVGRVAMTGVPHHAWERYTTQLVEKGYAVVICDQVEDA
SEAVGLVRREVTRILTPGTLLEEGMLKASRNNYLASVVIAANHWGLAYADISTGEFLTSQ
GSDLEHLTQELMRLQPSEVLFPTNAPDLGSLLRPGETSPHLPQCLPPAFCYCLRSQVPFS
QGEARSRLLQKFKVRSLEGLGCEHLPLAVRAAGGLLEYLEDTQKENQVPLQLLRTYTVTD
YLIVDHQTRRNLEITQTVRDGTFHGSLLWALDRTSTAMGGRALRRWLLQPLIDIKGIRAR
QDTIQELVENTALRQDLRQLLRQIYDLERLTGRAGSGTANAKDLMALADSLSRLPELSEL
VAEANSPFLRALQNVPPILEDLAQKLHAHIVESPPIHIKEGGLIRPGVNSLLDERKATVE
ADQQWIANLEVDERARTGIPTLKVGFNKTFGYYISISRAKSDQVPANYIRKQTLTNEERY
ITPELKERESRILSARDDLNQLEYEIFVALREEVGVQAEVIRHLSRAVAAADVLCGLAEL
AAQQGYCRPEILPGREIEIIDGRHPVVEQSLPAGFFVPNSTQLGQESLTNDKPDLIILTG
PNASGKSCYLRQVGLIQLMAQTGSFVPARFAKLGICDRIFTRVGAVDDLATGQSTFMVEM
NETANILNHATSRSLVLLDEIGRGTATFDGLSIAWAVAEYLATDIRSRTIFATHYHELNE
LAGMLANVANYQVTVKELPDQIIFLHQVQPGGADKSYGIEAGRLAGLPAVVIQRAKQVMG
QIEKHSKIAIGLREGL
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcttctgattttgacattcagccaacggaacccaacgatcctagtgcgcctcac
tcggacacgcgtctggtagaccgcagcaagcttagtaagatgtaccagcattatgtagag
gtgaaggataagtatcctcatgcgctgctgctgtatcgggtgggagatttctttgaaact
tttttccaagatgctgtaactgtatctcgcgaactggaactggttctgactagcaaacac
ggcggtgaagtgggtcgggtggcgatgactggtgtcccccaccacgcatgggaacgctac
actacccaactggtagaaaaaggctacgctgtggtgatttgcgaccaagtagaagatgct
tcggaagctgtggggttagtacggcgcgaggtgacgcgcattcttacccctgggactctg
ctagaagagggaatgttgaaagcaagtcgcaataattacctagcttctgtggtaattgcg
gctaatcattggggactagcctacgcagatatctcaacaggggaatttctgacatctcaa
ggtagcgatctagaacacctgactcaggaattaatgcgcttgcagccttcggaggtgctg
tttccgacgaatgctcccgatttgggtagtttactgcgtccgggagaaacttcaccccat
ctcccccaatgtttaccgccagctttttgttattgtttgcgatcgcaagtaccattttcg
caaggggaagccagaagtagattattgcagaaatttaaagtgcgatcgcttgaaggattg
ggttgcgaacacctccccctcgctgtccgcgctgctggtgggcttctcgaatacctggaa
gatactcaaaaagaaaaccaagttcctctacaactgttacgcacctataccgtcaccgac
tatctaattgttgaccatcaaaccaggcgtaacttggaaattacccaaactgtccgtgat
gggacatttcatggttccctgctgtgggcattagatagaactagcacagcgatgggcggg
cgggctttacgacggtggttactgcaaccgctaattgatattaaaggcattcgcgcaagg
caagataccattcaagaattggtagaaaatacagcgttacgtcaagatttgcggcaatta
ttacgtcaaatttatgacctcgaacggttaaccgggagggcgggttctggtactgctaac
gctaaagatttaatggctttggcagattctctctcacgcctaccagaattatccgagtta
gtagctgaagcgaattctccctttctgagggctttgcagaacgtgccaccgatattagaa
gatttggcacaaaaattacacgcccatattgtcgagtcaccacccatacatattaaggaa
ggtggcttgattcgtcctggtgtaaatagcctgttggatgagagaaaagcaaccgtagaa
gcggatcaacagtggattgccaatttagaagttgacgagagagcaagaacaggaatccca
actttaaaggtaggatttaataaaacttttggttattacattagtatttcccgtgctaaa
tctgaccaagtacccgcaaattacatccgcaagcaaacgctaacaaatgaggaacgttac
attacaccagagttaaaagaacgggaatctcgaattctttcagcacgcgatgatttgaat
cagttggaatatgaaatttttgtcgccttgcgagaagaagtcggagtacaggcggaagta
attcgccatctttcccgcgcggtggcggcggcggatgtattgtgtggtttggcagagtta
gcggcgcagcaaggttactgtcgtccagaaatcttaccaggacgggaaatagaaatcatc
gatggcagacatccggtagttgaacagtctttacctgcggggttctttgtacccaattcc
acccagttgggtcaagagtcattaacaaatgacaaacctgacttaattatcctcaccggg
ccaaatgccagtggtaagagttgttatttgcgtcaggtagggttgattcagttaatggcg
caaacggggagttttgtcccagctaggtttgcgaagttgggaatatgcgatcgcattttc
actcgtgtaggtgcagtagatgatttagctactggtcaatctacctttatggtggagatg
aatgaaacagcgaatattctcaatcatgccacatcgcgatcgctagtattgttagatgaa
attggtcggggaacggcaacttttgatggactttcgatagcttgggctgtagctgagtat
ctcgccacagatatccgttcccgaacaatttttgccacgcactaccacgagttgaacgaa
ctcgcagggatgttagcaaatgtcgctaattatcaggtaacagtgaaggaattacccgac
caaattatctttttacaccaagttcaaccaggaggcgctgataaatcctacggtattgaa
gcgggacggttagcaggtttaccagctgtggtcattcaacgagctaaacaagtgatggga
cagattgaaaaacacagtaaaattgcgatcggtttacgagagggtttatag
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