Calothrix sp. NIES-2098: NIES2098_66250
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Entry
NIES2098_66250 CDS
T08374
Name
(GenBank) ABC transporter-related protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
caln
Calothrix sp. NIES-2098
Pathway
caln02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
caln00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NIES2098_66250
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
caln02000
]
NIES2098_66250
Enzymes [BR:
caln01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
NIES2098_66250
Transporters [BR:
caln02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NIES2098_66250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_29
ABC_ATPase
RsgA_GTPase
AAA_22
AAA_21
Zeta_toxin
DUF5906
AAA_23
AAA_15
DUF87
Motif
Other DBs
NCBI-ProteinID:
BAY13430
LinkDB
All DBs
Position
complement(7948106..7949956)
Genome browser
AA seq
616 aa
AA seq
DB search
MSLRIKPAIGNLFKATNFWQENYLILREFKHFRKIAVLAVIFSFLAATFEGISIGFLLSF
LQSLTTPNAQPVRTGIEWFDIAILGINQSVTSRLYRICVLILLTTWMRASFNYLAQVYTE
LAQLHLSDRLRKQIFEQLQSLPLSYFAKTRSGELINTITTEIERIKQWFSGAAFLMTRAI
TAIFYFISMFLLSWQLSIASLLLFLLAGVGLSTLNARARESSFSTSIANGQFTSTIVEFI
NGIRTVQAFGTQGFERQRFYQASDNVVSTSKKVVLIWAMVRPLAESIASTILIGTIVFAF
TVFVVNGTLQVASLLTFFFVLFRLVPIIQDMNGTRAHLSTIAGAAVNIKDLIRTDNKTYL
RNGKLQFPGLKHSIDIVSVDFGYDPNHLVLNNVTLSIEKAKTTALVGATGAGKSTLIDLI
PRFYDPTEGHVMIDGVDTRKFDIDSLRRKIAVVSQDTFIFNTSVWQNIAYGTPGATETEI
REAAQLANALEFIEKMPEGFDTKLGDRGVRLSGGQRQRIAIARALLRNPEILILDEATSA
LDSVTERLIQESLEKISAGRTVIAIAHRLSTITKADKVVVLEQGRIVEQGLYQELLQQRG
KFWEYHQMQNELGQVG
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgtctttacgaattaaaccagcgatcggtaatttattcaaagctactaacttttggcaa
gagaactatttgatattgcgagaatttaaacatttccgcaaaattgctgtgctagcagtt
atattttcttttttagctgcaacatttgaaggcatcagcattggctttttactttctttt
ttacaaagcttaactactcccaacgcccaaccagtgcgcacgggtatagagtggtttgat
attgctattctgggtattaatcaatcagtgactagccgcttatatagaatatgtgtgctg
attttattaactacatggatgcgtgctagtttcaattatttagcccaagtttacacagaa
ttagcgcagttgcatcttagcgatcgcctgcgtaagcaaatttttgaacagttgcaaagc
ttgcctttgagttactttgctaaaactcgttctggcgaactaatcaatacaattaccaca
gaaattgaacgcatcaaacagtggtttagcggtgctgctttcttgatgaccagagctata
actgccatcttctactttatctcgatgtttttgttatcatggcagctttctattgcttca
ttactgctatttctcttagcaggtgtagggttatcaactctcaatgctcgtgctagagaa
agtagttttagcacttctattgctaacggtcaatttacatccacaatcgtagaatttatt
aacggaattcgcacagtccaggcatttggtactcaaggttttgagagacagcgcttttat
caggctagcgataatgtagttagtacttccaaaaaagttgtgttaatttgggcgatggtg
agacctctagccgaaagcatcgctagtacaattctcattggcacgatcgtttttgccttt
acagtttttgttgtcaatggtacacttcaagttgcttctttgctaacatttttctttgtg
ctatttcgcctagtaccgattattcaagatatgaatggtacgcgggcacatctgagtacg
atcgcaggtgcagcagtcaatattaaagatttaattaggactgacaataaaacttacttg
cgcaatggcaagttacaatttcctgggttaaaacattctattgatatcgtttctgtagat
tttggttatgaccctaatcatctagtcttaaataacgtcactctaagtattgaaaaagcg
aaaacaacagcactagtaggcgcaactggtgcaggtaagagtacgttaattgatttaatt
ccgcgattttacgatcctaccgagggtcatgtaatgattgatggagttgataccagaaaa
tttgacatcgattccttgcggcgcaaaattgctgtagttagtcaagatacatttattttc
aatacttctgtttggcaaaatattgcttatggtacgccaggagcaacagaaacagaaatt
agagaagccgcacagctagcaaatgctctcgaatttattgaaaaaatgcccgaaggcttt
gatactaaactaggcgatcgcggtgtgcgattatctggaggacaacgacaacgaattgcg
atcgcacgtgctttactacgaaatccagaaattttgattttggatgaagctaccagcgct
ttagattctgttaccgaacgcttgattcaggaatctttagaaaagatttccgcaggtcgc
acagttattgcgatcgcgcatcggctttctacaattaccaaagcagataaagttgtagta
ctagaacagggacggatagtagaacaaggtctctatcaagaattactacagcaacgcggt
aagttttgggaatatcaccaaatgcaaaatgaattaggtcaggtaggctag
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