Calothrix sp. NIES-2098: NIES2098_67080
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Entry
NIES2098_67080 CDS
T08374
Name
(GenBank) pseudouridine synthase, Rsu
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
caln
Calothrix sp. NIES-2098
Brite
KEGG Orthology (KO) [BR:
caln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
caln03009
]
NIES2098_67080
Enzymes [BR:
caln01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
NIES2098_67080
Ribosome biogenesis [BR:
caln03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NIES2098_67080
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
BAY13513
LinkDB
All DBs
Position
complement(8048435..8049010)
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AA seq
191 aa
AA seq
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MSKYRYIIFHKPYGVLSQFTQETPKHRTLKDYIPVPDVYPVGRLDWDSEGLLLLTNNGQL
QHRLANPRFGHERTYWAQVERIPDAEAINKLQTGIKIQDYRTRPAKVRLLLEEPSVGDRN
PPIRFRKNVPTAWLEITLTEGKNRQVRRMTAAVGFPTLRLVRVSIAHLQLHNLQPGQWRD
LTRAELEIFLG
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaatacagatatattatttttcacaaaccctatggcgttctgagccaatttacg
caggaaactcccaaacaccgtaccctgaaagactatattcccgtgcctgatgtgtatcct
gtagggcgtttagattgggatagtgaagggttactactgttgacgaacaatggacaattg
caacatcgtcttgccaatcctcgatttgggcacgaacgtacttattgggcgcaggtagaa
cgaattccggatgccgaggctatcaataaattgcaaacaggtataaaaattcaagattac
cgcactcgaccagcaaaagtccgcttattattagaagaaccatctgtaggcgatcgcaat
cccccaattaggtttcggaaaaatgtacctacagcttggctagaaataactttaactgaa
ggaaaaaatcgtcaggtgcggcgaatgactgcggctgtagggttcccaactctgcgattg
gttagggtaagtatcgctcacttacaattacataatctacaaccagggcagtggcgtgac
ctcacccgtgctgaactagaaatttttcttggttga
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