Calothrix sp. PCC 7507: Cal7507_0351
Help
Entry
Cal7507_0351 CDS
T02358
Name
(GenBank) exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
calo
Calothrix sp. PCC 7507
Pathway
calo03410
Base excision repair
calo03430
Mismatch repair
calo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
calo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Cal7507_0351
03430 Mismatch repair
Cal7507_0351
03440 Homologous recombination
Cal7507_0351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
calo03400
]
Cal7507_0351
DNA repair and recombination proteins [BR:
calo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Cal7507_0351
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Cal7507_0351
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Cal7507_0351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AFY30847
UniProt:
K9PE94
LinkDB
All DBs
Position
356424..358517
Genome browser
AA seq
697 aa
AA seq
DB search
MLDQALPKPQQPRRRLPNQRWQIYAQQTEFAEKLAVATKISPIISQLLINRGIATLEQAQ
GFLNPESLILPSPLEEFPDLALSVELLQNAIASQEKIAICGDYDADGMTSTALLLRSLRS
LGAVVDYAIPSRMHDGYGINQRIVEEFHSEGVSLILTVDNGISAFAPIARARELGLKVII
TDHHDIPQKLPPANAILNPKLIDESSPYRGVAGVGVAYILAVSLAQQLGATQGLIQPMLA
LFTLGTIADLAPLTGVNRRWVKRGLQYLPKSHLPGIQALIQVSGVQAKANEGGEIPNPKS
KIQNPKSLKPEDIGFRLGPRINAIGRIGDPQLVIDLLTTDDMGIALERAMQCEGINQQRQ
QMCEEIEQEAIAVVETQFIASLPQDRILVVIQPNWHHGVIGIVASRLVERYGVPVFIGTY
EDGGHIRGSARGIPEFNVFDALEYCHDLLGKFGGHKAAGGFSFSEANLPQLRSRLIEFAN
QCLEPQHLKPLLKIDTQANLSQINHQLYQQLQTLHPCGIENPDPVFWTPNVQVIEQKIVG
KGHIKLTLAQTIDHQQYKIKAIAWRWGDYFTLPSRLDIAYKLRENDFNGNSTIEMELVGV
RLPKQSHLLFTSSPKPLRTTFEYQQRHYTCGIYKQGLSPELRIKNPEGKVLAMQPGHTIG
LLGNNREDAKEIDVSQPQYDSIIQAALQALSVLSHES
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
gtgctagaccaagctttaccgaaaccccaacaaccccgtaggcgcttacctaatcagcgc
tggcaaatttacgcgcaacaaacagaatttgccgaaaagttggcggtggcgaccaagatt
tcaccgattatcagccagttgctgatcaatcgtggcattgccacactagaacaagcacaa
ggatttttaaatccagagtctctgatcttaccttcgccactggaggaattcccagattta
gcgctgagtgtggagttattgcaaaatgcgatcgcatctcaagaaaaaattgctatttgt
ggtgattatgatgctgatggcatgactagcactgctctattgttgcgtagtctccgcagt
ttaggcgctgtagtcgattatgctatccccagtcggatgcacgatggttatggcattaat
caacggattgtggaagaattccacagcgaaggggtgagtttaattctaactgtggataac
ggtatctcggcatttgcaccaattgccagagccagagaactcggtttaaaggtaattatt
accgatcaccatgacatcccgcaaaaattaccgccagcgaacgccatcctcaaccccaaa
ctgatagacgaatcctcgccttatcggggtgtagctggggtgggtgttgcatatatccta
gcggtgtctttagcacaacaactaggagcaactcaaggcttaatccagccaatgctagca
ctgtttacactgggaacgatcgcagatttagctcccttgactggcgttaatcgccgctgg
gtaaaacgcggtttacagtatctacccaaatctcatttacctgggatacaggcgctgatt
caggtatctggggtgcaggctaaagcaaatgaggggggagaaattcccaatccaaaatct
aaaatccaaaatccaaaatcccttaagccggaggatattggctttcgattggggccgaga
attaatgctattggccgaattggtgatcctcagctagtgattgatttgctgactacagat
gatatggggatagcgctggaaagagcaatgcaatgtgagggaattaaccagcagcgtcag
caaatgtgcgaggaaatcgaacaagaagcgatcgcagttgtagaaacgcaattcatcgca
tctttaccccaagaccgcatattagtagtcattcaacccaattggcaccacggcgttatt
ggtattgtcgcctctcgcttagtagaacgctatggtgtccctgtgtttattggcacttac
gaagatgggggacatattcgcggttcagcgcggggaattcctgaatttaacgtgtttgat
gctttggaatattgtcatgacttgctaggaaaatttggcggacacaaagccgccggggga
ttttctttcagtgaggcgaatttaccacagttgcgatcgcgtttgattgaatttgctaac
cagtgtcttgaaccccagcacctcaaaccattactcaaaattgatacccaagctaacttg
agccaaatcaatcaccagctttaccaacagctgcaaactctccatccctgcggtatcgaa
aatcctgatccggtgttctggacaccgaatgtgcaagtaattgagcaaaagattgtcggt
aagggtcacatcaaactcacacttgcccaaaccattgatcatcaacagtataaaattaaa
gcgatcgcctggcgttggggcgattacttcaccttaccgtcacgcctagacatcgcttat
aaactgcgagaaaatgactttaatggcaatagcaccatcgagatggaattggtcggtgtc
agactaccaaaacaatctcacctactgttcacctcgtcacctaaaccattaagaactacc
tttgagtaccaacagcgccactatacttgtggtatttacaaacaaggtttatccccagaa
ttaaggattaaaaatcctgaaggtaaagtcttagccatgcaaccagggcatacaatcggt
ttactcggcaataatcgtgaagatgccaaagaaattgatgtatcccaaccacagtatgac
agcatcatccaggctgccttacaagctttatcagtactgagtcatgagtcctga
DBGET
integrated database retrieval system
