Calothrix sp. PCC 7507: Cal7507_1690
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Entry
Cal7507_1690 CDS
T02358
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily
KO
K03090
RNA polymerase sigma-B factor
Organism
calo
Calothrix sp. PCC 7507
Brite
KEGG Orthology (KO) [BR:
calo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
calo03021
]
Cal7507_1690
Transcription machinery [BR:
calo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Cal7507_1690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
KORA
HTH_24
HTH_3
HTH_23
HTH_17
HTH_Tnp_ISL3
Sigma70_ECF
HTH_Tnp_4
MarR_2
HTH_8
HTH_11
HTH_AsnC-type
HTH_28
HTH_31
Xre-like-HTH
GerE
DUF1492
HTH_30
Tri-helical
AbiEi_4
HTH_38
Sigma54_DBD
LacI
Motif
Other DBs
NCBI-ProteinID:
AFY32147
UniProt:
K9PHY8
LinkDB
All DBs
Position
1829799..1830575
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AA seq
258 aa
AA seq
DB search
MPTTATNELKHEIWQILREYEKSRSETVRNQLVQLNFGLVRKEAHYWMNQCHESYEDLLQ
VGCLGLIRAIERFEISKGHAFSSFAIPYIRGEIQHYLRDKGVTVRIPRRYLALQQQAIGV
SRSLRTKYNRPPTDSELAAALEISTTEWQEIKLAWVNRAPLSLDVPVQDGEEGSTCLGEL
VPDPHYRSFQLAQEDQFRLQQALVQLENHTREVLECVFLQDLTQKQVAEHLGISVVTVSR
RVKKGLDLLKHIMGAADD
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgccaactacagctaccaacgaactgaagcacgagatttggcagatcctgcgagaatat
gaaaaatctcgctcagaaactgtccggaatcaactagtgcaactcaattttggacttgtg
agaaaagaagctcactactggatgaatcaatgccatgaaagctatgaggacttactccaa
gtaggctgtttgggtttaattagagctattgaaagatttgaaatttctaaaggacatgct
tttagttcctttgctatcccttacattcgcggcgaaattcagcattatctccgggataaa
ggtgtcacggtgcgaattccccgacgttatttagctctacaacagcaggctataggagtt
tcgcgctctttgcgtacaaaatacaaccgcccacccactgactcggaactagcagcagca
ttggaaatttctacaaccgaatggcaagaaattaaattagcatgggtgaatcgcgctcct
ttaagcctagatgtaccagtgcaggatggagaggaagggtctacatgtttgggagaattg
gttccagatcctcattaccgcagctttcaactggcgcaagaagatcaatttcgtttacaa
caagcattggttcagctagaaaaccacactcgtgaagttttggaatgtgtatttttgcaa
gacttgacgcaaaaacaagtagcagaacatcttgggattagtgtagttacggtttcccgt
agagtcaaaaaaggattggatttactcaaacacatcatgggcgcggcagatgattaa
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