Calothrix sp. PCC 7507: Cal7507_3008
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Entry
Cal7507_3008 CDS
T02358
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
calo
Calothrix sp. PCC 7507
Pathway
calo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
calo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Cal7507_3008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
calo03021
]
Cal7507_3008
03400 DNA repair and recombination proteins [BR:
calo03400
]
Cal7507_3008
Enzymes [BR:
calo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Cal7507_3008
Transcription machinery [BR:
calo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Cal7507_3008
DNA repair and recombination proteins [BR:
calo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Cal7507_3008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
DUF961
Motif
Other DBs
NCBI-ProteinID:
AFY33421
UniProt:
K9PKF1
LinkDB
All DBs
Position
3431518..3431760
Genome browser
AA seq
80 aa
AA seq
DB search
MTMLKRSKFETTQSQIMHRAEDLISAASNRYRITVQVANRAKRRRYEDFESAEDAMMKPV
LRAIIEMSDELTQPEIIGEI
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atgactatgctaaagcgttctaagttcgagaccacccagtctcaaatcatgcaccgtgct
gaagatttgattagtgcagcttcaaatcgctaccgcattacagttcaagtggcaaatcgt
gccaagcgtcggcgttatgaagactttgaaagtgcagaagatgccatgatgaaaccagtt
ctcagggcaattatcgagatgtccgatgagctaacacagccagaaattattggcgaaatt
taa
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