KEGG   Calothrix sp. PCC 7507: Cal7507_3292
Entry
Cal7507_3292      CDS       T02358                                 
Name
(GenBank) Sigma 54 interacting domain protein
Organism
calo  Calothrix sp. PCC 7507
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_CDC20-Fz EIF3I WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Ge1_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st ANAPC4_WD40 Beta-prop_WDR75_1st nSTAND1 NBCH_WD40 Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_EIPR1 Beta-prop_EML eIF2A Beta-prop_WDR19_1st PD40 RMC1_N Beta-prop_WDR35_TULP_N WD40_RFWD3 Beta-prop_HPS5 Beta-prop_RIG_2nd TPR_2 Beta-prop_NUP159_NUP214 TPR_12 Beta-prop_DCAF4 TPR_1 Beta-prop_IFT140_1st AAA_16 TPR_9 RsgA_GTPase Beta-prop_IP5PC_F TPR_11 Beta-prop_DCAF12 WDR54 DUF6852 DUF3886
Other DBs
NCBI-ProteinID: AFY33697
UniProt: K9PMC6
LinkDB
Position
complement(3769191..3774602)
AA seq 1803 aa
MTNDQINRSLEQLAWAIQASVGQFKLILAKCNYVQQRDRLIARLQEISTVKISVLALKPS
QRTLYTAIREELGDDVQALMVVGLDKLPDLAQMLTSANQVREEFRKSFPFPIVLWVNDEV
HQQLMQLAPDLESWATTKTFAITINELTKLIQQTASQLFDDVLNINLEIISEIKSAWQEL
QHQGADLTPELKADCDFLLGLVEYIHKNFDAAIEHYNQSLDYWRTIEEGTMQALTSTPLS
EQSRTVTERSRSDRSRSDRQGKILTQITICYYEKAIADEKNCLQTTSLNQTEQSQTPQPE
DLVREGGLRLYSRDFQSPGLSINRQTISNYLQQSIAAFAAAQRPDLIADSLDKFGIILRY
LQDWQQLKTLAAQALIIHEAENNLIKISQDYGFLAETALAQNDWQQAKELAETALTFLSV
PHQPAPPELSRINVITHRQSLLFILAQAQENLAQHHKVISPDVGARHGRALTGVPHVTEN
CYKAAINNLEAARKLGITDNDPQLYLRILEKLHSLYFHQKQYLDAFDAKQEARSIEQQFG
LRAFIGAGRLQAAKQLETQVLAALQVNNQDDIAPEIAASGRQLDVERLIERIGRPDYKLI
VIHGQSGVGKSSLVNAGLVPALKRKAIGVQDNLVVAIRVYTNWVEELGGVLLGDERDEGD
EGDEGDRGDSSSSERDNSTFLLNTPSSEHDNSSSERDNSTFLLNTPSSEHDNSSSERDNF
TFLLDTPSSEHDNSSSELENSTFLLDTPSSKPQTPHSPSSSSSPSSPSSLALLTQLKENE
QRNLRTVLIFDQFEEFFFVYPEPKQRRQFFEFLGECLNILSVKVILSLRMDYLHYLLECN
RLSSLKIIGNDILSKNVLYELGNFSPDDTKSIIQRLTAKTTFYLEPTLIDKLVQDLAGEL
GEVRPIELQVVGAQLQTESITTLAKYQELGSNAKEELVKRYLAEVVDDCGVENQQAAELL
LYLLTDEKGTRPLKTRAEIERDLQALLADVTTDSNKLDLILEIFVKSGLVVLLPENPADR
YQLVHDYLAAFIRQQQEPKLKQVMAELEEERKQRKISEKQRKISEAKLNSFLKRALMGSV
AAGLVLAGLAVTAWDAAKRAENQKKQADVSEINAITNSSEALFLSGLNFDALIEGLKAGE
NLKSAELATPSTRMQTIATLRQAVYLQPDENKFRELNSLEGHSSPVYSVCFSPDGKTIAT
ASGDRTVKLWDISGKQLKTFQGHSGAVRGVSFSPDGKTIATASLDSTVKLWDISGKQLKT
LKGHSGWVSSVSFSPDGKTIATASDDGTVKLWEISGKLLKTLQGYSGGVLGVSFSPDGKT
IATANGDTTVKLWEISGKLLKTLKGHSNAVRGVSFSPDGKTIATASDDTTVKLWDISGKQ
LKTLQGHSNAVRGVSFSPDGKTIATASLDTTVKLWDISSKQLKTLKGHSGAVLGVSFSPD
GKTIATASADSTVKLWDISGKLLKTLNGHSNAVWGVSFSPDGKTIATASTDTTVKLWDIS
GKLLKTLKGHSNAVWGVSFSPDGKTIATASVDSTVILWDLDLDNLLASGCQRLNNYLPTH
ADVLEDLKACQTPAIKKAAAPALVAQGEELARTENINLAVSKFRQALEWNPSLKLDPQTK
AKQLAEASALVAKGEKLAQESKLEDAVANFQQALQLDSSLDFKPKTKAAALLVESGASLV
REDKFKEALAAYTNAQKFDPKVEISADDWHTLCRKGSLQKQVADVMFACNQAVKLAPNDG
NIRDSRGLARALTGDYPGAIADFEDYIAQTDDKDIKAQRQSWVKDLKAGKNPITDDELKR
LRN
NT seq 5412 nt   +upstreamnt  +downstreamnt
atgacaaatgaccaaataaatcgctctctggaacaattagcttgggcaattcaagcttct
gtagggcagtttaagctaattttggcaaagtgcaattatgttcaacagcgcgatcgccta
attgccagattacaggaaatttctactgttaaaattagcgttttagcgctcaaaccatcc
caaaggacactttacaccgccattcgtgaagaacttggggatgatgtgcaagctttgatg
gtggtggggttagataaattgccagatttagcccaaatgttgacttcagctaatcaggtg
cgggaggagtttcgtaaaagtttccctttcccgattgtgttgtgggttaacgatgaagtt
caccagcaattgatgcagctagcgccagatttagagagttgggcgactacgaaaaccttt
gcgattactattaatgaattaactaagttaatccaacagacagcatcacaattatttgat
gatgttttaaatataaatttagaaattatttccgaaattaaatcagcttggcaagaatta
caacatcagggggcagatttaacacctgagttaaaagccgactgtgattttttattaggt
ttagttgaatatattcataaaaattttgatgcagctattgagcattacaaccaaagttta
gattattggcgaacaattgaagaaggcacaatgcaagcgctcacttcgactccgctcagt
gaacagagccgaacggtcactgagcgaagtcgaagtgaccgtagtcgaagtgaccgtcaa
ggtaagatacttacacaaatcaccatttgctattacgaaaaagctatagcagatgaaaaa
aattgcctgcaaacaaccagcctaaatcaaaccgaacaaagccaaacaccccaacctgaa
gatttagtccgcgaaggcggacttcgtttgtatagccgcgatttccaatcgccaggtctt
tctataaataggcagacaattagtaactatctccaacaaagtatcgccgcatttgcagcc
gctcaacgccctgatttaattgctgattctcttgacaaatttggcatcattctccgttat
ttacaagattggcaacaactcaaaactttagctgcacaggctttgattatccatgaagcc
gagaataatctcattaaaatatctcaagattatggctttttggctgaaactgcactagca
caaaacgactggcaacaagcaaaagaattagccgaaacagcattaacatttttatctgtg
cctcatcaacccgcgccgccggaattatcgcggattaatgtaattactcatcggcaatca
ttattatttatcctggcgcaagcacaagagaatttagcacaacatcacaaagttatatcg
ccagatgtaggggcacggcacggccgtgcccttacgggcgtacctcatgtaaccgagaat
tgctataaagcagcaattaataatttagaagcagctagaaaattaggaattacagataac
gacccccagctttatttgcggattctggagaaattacacagcctatactttcatcaaaag
caatatctcgatgcatttgatgccaagcaagaagcgcgttctattgagcagcaatttggt
ttgcgggcgtttattggtgcagggagattacaagctgccaaacagttagagacgcaagtt
ttagcagcattacaggttaataatcaagatgatatcgccccagaaatcgccgcatctggt
cgtcaattggatgtagaacggttaattgaacgcatcggtcgccctgattataaattaatc
gtcattcatgggcaatcgggtgtgggtaaaagttctttggtaaatgcgggattggttccg
gctttaaaacggaaagcgattggcgtgcaagataatttagtagttgctattcgcgtgtat
accaattgggtggaagagttgggaggggtgttgttgggggatgagagagatgagggggat
gagggagatgagggggacaggggagacagttcgagttcagaacgggacaattccaccttt
ttactcaatactccgagttcagaacatgataattcgagttcagaacgggacaattccacc
tttttactcaatactccgagttcagaacatgataattcgagttcagaacgcgataatttc
acctttttactcgacactccgagttcagaacatgataattcgagttcagaactcgaaaat
tccacctttttactcgacactccaagctcaaaacctcaaacccctcactctccctcatcc
tcctcatctccctcatccccctcatctctcgccctcctcactcaactgaaggaaaacgaa
cagcgcaatctgagaactgtgctaatttttgaccaatttgaagaatttttcttcgtttac
ccagaaccaaaacagagacggcagttttttgagttcttgggagaatgtctaaatatcctt
tctgtgaaagtgatattgtcactgcggatggattacttgcattatttgctggagtgcaat
cgcctttcgagtctgaagattattggcaatgatattctcagcaagaatgtgctttatgag
ttggggaatttttcgcctgacgatactaagtcaattattcagcgcttaactgcaaaaact
acattttatttagaacctacgttaattgacaaactagttcaagatttagccggggaactg
ggagaagtgcgcccgattgagttgcaggtggtgggggcgcaactgcaaacggagagtata
acaactctggcgaagtatcaagaacttgggagtaacgctaaagaagaactggtgaagcgc
tacttagcagaggtggttgatgattgcggtgtagagaatcagcaagcggcagaattgttg
ctgtatttactcaccgatgaaaaagggactcgccccctgaagactcgcgctgaaatagaa
cgagatttgcaagcattattggcagatgtcaccacagacagcaataaattagatttgata
ttagagatttttgtcaaatctggcttagtggttttattgccagaaaacccagcagaccgt
tatcaactagtgcatgattatttagccgcctttatccgccagcaacaggaacccaagtta
aaacaggtgatggcggaactggaggaagaaagaaagcaaagaaaaattagtgaaaagcaa
agaaaaattagtgaagccaaacttaatagctttctcaaacgcgccctcatgggttcagtt
gcagccggattggtattggctgggttagcagtcaccgcctgggatgcagcaaagcgggca
gaaaatcaaaaaaaacaagccgatgttagtgaaatcaacgccattactaattctagcgag
gcactttttctctctgggttgaactttgatgccctgatagaaggcttaaaggcaggagaa
aacctcaaaagtgcagaattggcaaccccaagcacccgaatgcagacaattgccacatta
cggcaggcagtatacttacaaccagacgaaaataaatttagagaacttaacagcttagaa
gggcatagcagtcctgtctatagtgtatgtttcagtcccgatggcaagaccattgccaca
gccagtggtgacaggacagtcaaactctgggacatctccggcaaacaactcaaaacattc
caggggcatagcggtgctgtcaggggtgtgagtttcagtcccgacggcaagacaattgcc
actgcaagtttagacagcacagtcaaactctgggacatctccggcaaacaactcaaaacc
ctcaaggggcatagcggttgggtctctagtgtgagtttcagtcccgacggcaagaccatt
gccacagctagtgatgacggcacagtcaaactctgggaaatctccggcaaactactcaaa
acactccaggggtatagcggtggtgtcttgggtgtgagtttcagtcccgacggcaagacc
attgccactgccaatggtgacacaacagtcaaactctgggaaatctccggcaaactactc
aaaactctcaaggggcatagcaatgctgtcaggggtgtgagttttagtcctgacggcaag
accattgccactgcaagtgatgacacaacagtcaaactctgggacatctccggcaaacaa
ctcaaaactctccaggggcatagcaatgctgtcaggggtgtgagtttcagtcctgacggc
aagaccattgccactgcaagtttagacacaacagtcaaactctgggacatctccagcaaa
caactcaaaaccctcaaggggcatagcggtgctgtcttgggtgtgagtttcagtcctgac
ggcaagaccattgccactgccagtgctgatagcacagtcaaactctgggacatctccggc
aaactactcaaaactctcaatgggcatagcaatgctgtctggggtgtgagtttcagtccc
gacggcaagaccattgccactgcaagtactgacacaacagtcaaactctgggacatctcc
ggcaaactactcaaaaccctcaaggggcatagcaatgctgtctggggtgtgagtttcagt
cccgacggcaagaccattgccactgccagtgttgacagcacagtgattttatgggatttg
gatttagataatttattagccagtggttgtcaacgcctgaataattacctacctacccat
gcagatgtattagaagacctcaaggcgtgccaaactccagctattaaaaaagcagccgca
ccagcattagttgcccaaggtgaagaattagcccgaacagaaaatattaatcttgctgtc
tccaagttccgccaagcactagagtggaatcccagcttaaaacttgacccacaaacaaaa
gcaaaacaattggcagaggcttcagccctagttgcaaagggtgaaaagttagcgcaagaa
agtaagcttgaggatgcagttgccaatttccagcaagcattgcaactagactctagttta
gactttaaaccaaagacaaaagcagctgctttattagttgagtcaggagcaagccttgtc
agagaagataagtttaaggaagcattagcagcttacaccaacgcccaaaagtttgaccca
aaagttgaaatttctgccgatgattggcatacactatgccgcaaaggtagtctgcaaaaa
caagttgccgatgtaatgtttgcctgtaaccaagccgtgaagcttgcacccaatgatggc
aatattcgcgatagtcgtggcttggcgcgggcgttaacaggcgactatccaggggcaatt
gctgactttgaggactacatcgcccagactgatgataaagatatcaaagcccaacggcaa
agctgggtgaaagacctgaaagccgggaagaatccgattacagatgatgaactgaagcgc
ctgcggaattag

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