Calothrix sp. PCC 7507: Cal7507_3420
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Entry
Cal7507_3420 CDS
T02358
Name
(GenBank) Exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
calo
Calothrix sp. PCC 7507
Brite
KEGG Orthology (KO) [BR:
calo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
calo03016
]
Cal7507_3420
Enzymes [BR:
calo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Cal7507_3420
Transfer RNA biogenesis [BR:
calo03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Cal7507_3420
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD_RNase_II
HTH_RNase_II
Motif
Other DBs
NCBI-ProteinID:
AFY33819
UniProt:
K9PM05
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All DBs
Position
3908943..3910994
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AA seq
683 aa
AA seq
DB search
MDKGTLVEFRVQGDRRLGVVDRPDGKTRWFVVDERGQSHSLAPRQITYTVNGQTYKPTEI
DHFLEQVKPYLDPSSLEVAWELLVEDGETITPSQMANLLFSESAAPHCYAAHCLLSDDKL
YFKQKGDAYETRTAAQVAERKHQLEVEAQKARGQQEFLSRVEQALTGVAVEWQRHDRQRL
EGLEKYAALMADIVRTGVNYDSLSRAYPPPATVLETMTMLGRSATPQGAFQLLVDLGWWS
SNENLFLRRSSIPVQFPSKVLEVAQQRLDFPPSDQDGTRLDLTHLKVYTIDDESTTEIDD
GLSWESLPDGREHLWVHIADPTRLLAPEDDLDLEARKRGSTVYLPTGMIPMFPEVLATGP
MSLVQGRVCCALSFGVVLDQTGAVAEFNIYPSFIKPTYRLTYEDVDEMLELGVEAEPEIA
AIALWAKRRRNWRYDQGAISINMPEAMIKVKGDEISIDILDDSSSRQLVAEMMILAGEVA
ARYGQTHNIPLPFRGQPQPELPPEEELLQLPAGFVRACAMRRCMPKSEMSITPVRHAGLG
LNTYTQATSPIRRYSDLLTHFQLKAHLRGEVLPFSAEQLKEVMMTVTSTTQEVTMVERQT
NRYWALEYLRRQPEQVWQVTVLMWLREDSNLALILLEDLGLQLPMSFRRDVNLGEQLLVK
VGLADPQKDMIQFQEIIYQEALN
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
gtggacaagggtacgctagttgaatttagggttcaaggcgatcgccgtttgggggtagta
gaccgtccagacggcaagacccgttggtttgtggtagacgaacgcggccaatcccatagc
ctcgcgcctagacaaatcacatatacagttaacggacaaacttacaagccaactgaaatt
gaccactttcttgagcaggtcaagccatatttagatccatcaagcttagaagtagcttgg
gaattactcgttgaagatggggaaacaatcaccccgtcccaaatggcaaatctgctgttt
tcggaatcagcagcgcctcattgttacgccgcacactgcttgttatcagacgacaaactc
tatttcaagcaaaaaggagatgcttatgaaactcgcaccgcagctcaggtagcagaacgc
aagcatcagttagaagtagaagcccaaaaggctaggggacaacaggaatttttgtcgcgt
gtagagcaggcactcactggcgttgcagtagaatggcaacgtcacgatcgccagcgtcta
gaaggactagaaaaatacgcagccttgatggcggatatcgtgcggacaggggtaaattat
gactctttgtctagagcttatccccccccagcaacagtattagaaaccatgaccatgctg
ggacgttccgctaccccccaaggagcctttcagcttttggtagacttaggctggtggagt
agcaatgaaaacttattcctgcggcgttcgtcaattccggttcagtttcctagcaaggta
ttagaagtggcgcaacagcgtttggatttcccaccatccgaccaagatggaacccgtttg
gatttaacgcacctgaaggtgtacacaattgatgatgaaagcacgaccgagatagacgac
ggtctaagttgggaatcactcccagatggacgggagcatctgtgggtgcatatagctgac
cctactcgcttgctagcgccagaagacgatttagatttagaagccagaaagcggggtagt
acagtttatctaccaacgggaatgatccccatgttcccggaagtattagccactggtccg
atgagtttagtacaagggcgggtttgttgcgccttgagctttggtgtggttttagatcaa
accggagcagtagcagaatttaacatttatcccagcttcatcaaaccaacctatcgcctc
acctatgaagatgtggatgagatgctggaattaggggtagaagcagaaccagaaattgcg
gcgatcgcactttgggctaaacgacgccgcaattggcgctacgatcaaggtgccatcagc
attaatatgccggaagccatgatcaaagtcaaaggcgacgagatcagcattgatatttta
gatgactcctcatcacggcaactagtagcagaaatgatgattttagccggcgaagtagcc
gcacgctacggtcaaactcataacattcccctcccttttcgcggtcagccacagccagaa
ttacccccagaagaggaattactccaactaccagcaggatttgtccgcgcctgtgctatg
cgtcgttgtatgccgaaaagtgagatgagcatcactcctgtgcgtcatgcaggtttgggt
ttgaatacttacacccaggcgacttctcccattcgtcgctatagcgacttgctcacccac
ttccagctaaaagctcatttacgcggtgaagttttacctttttcagccgaacaactcaaa
gaagtgatgatgacagtcaccagtacaacccaagaggtgacaatggtagaacggcaaact
aacagatattgggctttagaatatttacgtcgtcagccagagcaagtttggcaagtgacc
gttttaatgtggctcagagaagacagcaatttggcactaattttgttagaagatttgggt
ttgcaattgccaatgtcttttagaagggatgttaatttaggcgaacaattgttagtcaaa
gttggcctcgccgatccacaaaaagatatgattcagtttcaagaaataatttaccaagaa
gcacttaattaa
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