Calothrix sp. PCC 7507: Cal7507_4055
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Entry
Cal7507_4055 CDS
T02358
Name
(GenBank) nucleic acid binding OB-fold tRNA/helicase-type
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
calo
Calothrix sp. PCC 7507
Pathway
calo03030
DNA replication
calo03430
Mismatch repair
calo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
calo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Cal7507_4055
03430 Mismatch repair
Cal7507_4055
03440 Homologous recombination
Cal7507_4055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
calo03032
]
Cal7507_4055
03400 DNA repair and recombination proteins [BR:
calo03400
]
Cal7507_4055
Enzymes [BR:
calo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Cal7507_4055
DNA replication proteins [BR:
calo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Cal7507_4055
DNA repair and recombination proteins [BR:
calo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Cal7507_4055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HHH_6
tRNA_anti-codon
Intein_splicing
Nitr_red_bet_C
Motif
Other DBs
NCBI-ProteinID:
AFY34439
UniProt:
K9PNT9
LinkDB
All DBs
Position
4596199..4597551
Genome browser
AA seq
450 aa
AA seq
DB search
MVKVITRKYIGKENVYDIGVELDHNFAIRNGLVASNCFNKSHSTAYGYVTYQTAYLKANY
PLEYMAALLTANSGDTDKVQKYINNCTNMGIQIDPPDINRSGLDFTPAAGKILFGFSAVR
NVGQNAIACILEARNEGEGFKSLGDFCDRIDLRAVNRRTLESLISCGAFDKIESNRQQLM
NDLPLVYDWAQSRAKDKASGQGSIFDLLGGGFSTPNGKTTSNAFEIAPKSQPVADFPPQE
KLRLEKELLGFYVSDHPLKSLRQIAPLLTPINLSQLSEQREDTKLCAVIMLNGVKKVLTK
KGDSMAILQIEDLTTQLEAVVFPKTYERISSLLQVDARLIIWGKVDRRDEKNQFIVEDAE
PVETVQMVMVELNPQQAGDIQELQRLKTILQEQSGDKEKAKMPVIGIVQTENSRKLVRLG
WQFCVQDSRITVQALQNARFIAHVKPLTGS
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaagtaattacgcgcaaatatataggtaaagaaaatgtctatgacattggggtt
gagctagatcataactttgctattagaaatggtttagttgcgtctaattgtttcaataaa
tcccattcaactgcttatggttatgtgacctatcaaactgcatatttaaaagctaattat
ccgctagagtatatggcggcgctgttgacagctaacagtggcgacacagataaggtgcag
aaatatattaacaactgcaccaatatgggtattcagattgatccgccggatattaaccgc
tctggtttggattttacaccagcggcgggaaaaattttatttggattttctgcagtgcgg
aatgtgggacaaaatgcgatcgcctgtattttagaagcgagaaacgagggagaggggttt
aaatctctaggggatttttgcgatcgcatcgatttgcgtgccgttaaccgcaggacttta
gagtcgttgatttcttgtggagcctttgacaaaatcgaatctaatcgccagcagttaatg
aatgacctaccactagtatatgattgggcacagtctcgcgccaaagataaagctagcggt
caaggaagtatttttgatctattaggcggtggcttctctactcctaatggcaaaaccaca
agtaatgcttttgaaattgctcccaaatcccaacctgttgctgattttccaccccaggaa
aaattacgtctagaaaaagaacttttgggtttttatgtatcagatcatccactaaaatct
ttaagacaaatagcaccactactgacgccaattaacctttcgcaacttagcgaacaaaga
gaagacacaaagctttgtgcagttattatgctcaatggcgtgaaaaaagtcttgactaaa
aaaggcgactcaatggcaattttacaaatagaagatttaactacacaattagaggctgta
gtctttccaaaaacttatgaacgtattagttcactacttcaagttgatgctaggttgatt
atttggggtaaagtagaccggcgtgatgaaaaaaatcaatttattgttgaagatgcagaa
ccagtagaaacagtacaaatggtgatggtagaactgaatccccagcaagcaggcgatatt
caagaactacagcgcttaaaaacaattttacaagagcagtcaggggataaagaaaaggca
aaaatgccagtgatcggaattgtacaaactgaaaattctcgcaaactggttcggttgggt
tggcaattttgtgtacaagattctaggataaccgttcaagccctgcaaaatgctagattt
atcgctcatgtaaaaccattgactggtagttga
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