Calothrix sp. NIES-3974: NIES3974_01110
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Entry
NIES3974_01110 CDS
T09641
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cals
Calothrix sp. NIES-3974
Pathway
cals03030
DNA replication
cals03430
Mismatch repair
cals03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cals00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NIES3974_01110
03430 Mismatch repair
NIES3974_01110
03440 Homologous recombination
NIES3974_01110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cals03032
]
NIES3974_01110
03400 DNA repair and recombination proteins [BR:
cals03400
]
NIES3974_01110
Enzymes [BR:
cals01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NIES3974_01110
DNA replication proteins [BR:
cals03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NIES3974_01110
DNA repair and recombination proteins [BR:
cals03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NIES3974_01110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
Intein_splicing
Motif
Other DBs
NCBI-ProteinID:
BAZ03485
UniProt:
A0A1Z4NCS4
LinkDB
All DBs
Position
complement(138488..141115)
Genome browser
AA seq
875 aa
AA seq
DB search
MSFVPLHIHSDYSLLDGASQLPALIDRAIELGIKAIALTDHGVMYGAVELLKICRNKNFK
PIIGNEMYVINGDITKQERRPKYHQVVLAKNTQGYKNLVKLTSISHLQGFQGKGIFGRPC
INKDLLQQYHEGLIVTSACLGGEIPQAILSNRRDAARKVAKWYKDVFGEDFYLEIQDHGS
QQDRIVNVEIIRIARELGIKFVATNDSHFISCYDVEAHDALLCIQTGKLITEEKRMRYSG
TEYLKSAEEMRLLFRDHLPDDVIEEALLTTVEVADKVEPYEILGEPRIPHYPIPPGHTTD
TYVEEVAWQGLITKLRCKNRHELEPVYRERMEYELKMIQQMGFSGYFLIVWDYIKFARDN
NIPVGPGRGSAAGSLVAYAMGITNIDPVHHGLLFERFLNPERKSMPDIDTDFCIEKRDKV
IEYVTQKYGTERVAQIITFNRMTSKAVLKDVARVLNIPYGEADKMAKLIPVSRGKPTPLK
KMISEDTPAAEFKEKYDNDPRVRHWIDMAIRIEGTNKTFGVHAAGVVISAEPLDEIVPLQ
RNNDGSVITQYFMEDLDSIGLLKMDFLGLKNLTMIQKTLDLIEQNHGYKLDPYEITAQER
KAQKILAKGGETAKLPHDVRKTYELLESGELEGVFQLESSGMRQIVRDLKPSNIEDISSI
LALYRPGPLDAGLIPKFINRKHGREIIEYEHTILEPILNETYGIMVYQEQIMKIAQDMAG
YSLGGADLLRRAMGKKKVSEMQKQQALFIDGSTKNGVKKQVAEKLFDDMLKFAEYCLSYD
TRILTAEYGFLKIGEIVEKQIECSVFTVDGNGCIYTQPVAQYHHRGIQEIFEYELADGSL
IRATKDHKFMTLEGEMLPIDDIFHRGLDLMQIAVE
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcgttccattgcacattcatagtgattacagtctacttgatggtgctagtcag
ttacccgcattgattgaccgagcaattgaattaggaatcaaagcgatcgcactgacagac
cacggagtcatgtatggagcagtggaactactgaaaatctgccgcaataagaattttaaa
ccgattatcggtaacgaaatgtatgtgattaacggtgatattacgaaacaggaacgtcgt
ccaaaatatcaccaagttgttttagccaaaaatacccaaggttacaaaaatttagtgaag
ttaacatctatttcccatctgcaagggtttcagggaaagggtatttttggtcgtccttgt
attaataaggatttattacagcagtatcatgaaggtctaattgtcaccagtgcttgttta
gggggagaaataccccaagctatccttagcaatcgacgtgatgcagcaaggaaggtggca
aaatggtacaaagatgtatttggtgaggatttttatttagaaattcaagaccacggttcc
caacaagaccgaatcgtcaatgtggaaattattagaattgctcgtgagttaggaatcaag
tttgtcgcaactaatgattcccattttatttcctgttacgatgtggaagctcatgatgct
ttactctgcattcaaaccgggaaattaattactgaagaaaaacgaatgcgctattcgggg
acggaatatttaaaatcagctgaagaaatgcgtttattattccgtgaccatctcccggat
gatgtgatagaagaagcgttattaacaactgtagaagttgctgataaagtagaaccctat
gaaattttaggagaacccagaattccccattatcctattccccctggtcatactactgat
acctatgtggaagaagttgcttggcaaggtttaatcacaaaattacgttgcaaaaatcgc
cacgagttagaaccagtataccgggaaaggatggaatatgaattaaaaatgattcagcaa
atgggtttttccggctattttttgatagtttgggattacattaaatttgctcgcgataat
aatattcctgtcggtccagggaggggttcggcggctggttctttggtcgcctatgcaatg
ggaatcactaatattgacccggttcaccacggtttactatttgagcgatttctcaatcca
gagcgtaaatcaatgcccgatattgatacggatttctgtattgaaaaacgggacaaagta
atcgaatatgttacccaaaaatatggtacagaaagggtcgctcagattattacttttaac
cgcatgacttctaaagcagtgttaaaagatgtggccagggtgttaaatattccctacggt
gaagcggataaaatggccaaattaattccggtttcgcgggggaaacccacacctttgaaa
aaaatgatttcagaagatactccagccgcagaatttaaggaaaaatatgataatgacccc
cgtgttcgccattggatagatatggcaattcggattgaggggacaaataaaacctttggt
gtacatgctgcgggtgtggtgatttcggcggaacctttggatgaaattgttcccttgcaa
cgtaataatgatgggtcggtgattacccagtattttatggaagatttggattccatcggt
ttattaaaaatggactttttggggttaaaaaatttgaccatgattcaaaaaaccctggat
ttaattgaacaaaatcatggttataaacttgacccctatgaaattacagcccaggaacgc
aaagctcagaaaattttagccaaaggtggagaaacagccaagttaccccatgatgttcgt
aagacctatgagttactagaatccggggaattagaaggagtgtttcagttagaatcttca
gggatgcgacaaattgtccgtgatttgaagccttctaatattgaggatatttcgtcgatt
ttagctttgtatcgtccgggtcctttggatgcaggactaattcccaagtttattaatcgt
aaacatggacgggaaataattgaatatgagcatacgattttggaaccaattttaaatgag
acctacggaattatggtgtatcaggagcaaattatgaaaatcgctcaggatatggctggt
tattccttgggtggtgcagatttgctgcgtcgagcaatgggtaaaaagaaagtttccgaa
atgcaaaaacagcaagctttatttattgacggttccaccaaaaatggggtgaaaaaacag
gttgccgaaaaattatttgatgatatgctcaaattcgctgaatattgtttgagttatgat
acacgaattctcaccgcagaatacgggtttttaaaaatcggtgaaattgtcgaaaagcag
attgagtgtagtgtgtttaccgtagatgggaatggatgcatatatacccaaccagttgct
cagtaccatcatcgggggatacaagaaatatttgagtacgaattggcagatggttcccta
attcgagcaactaaagaccacaaatttatgacgctggagggggaaatgttaccaatcgat
gacatatttcatcgtggattagatttgatgcagattgctgttgagtga
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