Calothrix sp. NIES-3974: NIES3974_06450
Help
Entry
NIES3974_06450 CDS
T09641
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cals
Calothrix sp. NIES-3974
Pathway
cals03420
Nucleotide excision repair
cals03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cals00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NIES3974_06450
03430 Mismatch repair
NIES3974_06450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cals03400
]
NIES3974_06450
Enzymes [BR:
cals01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NIES3974_06450
DNA repair and recombination proteins [BR:
cals03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NIES3974_06450
MMR (mismatch excision repair)
Other MMR factors
NIES3974_06450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
AAA_30
AAA_12
DUF3138
Motif
Other DBs
NCBI-ProteinID:
BAZ04015
UniProt:
A0A1Z4NEA5
LinkDB
All DBs
Position
792992..795334
Genome browser
AA seq
780 aa
AA seq
DB search
MTDTTDKIINPDIQTRLTASIALLRQKLRSGQQQMADWVGGQLAVSAVPGAGKSYGMAAA
AAIAIARQYLAVANSGRSVSRRQLVVVTFTRSAAANIKAKIAENLKKMALPQTGFAVYTL
HGLALNIATRHPDLSGLDLNNATLITPNQSHRFVRLAVEKWIASHPQAYLRLLEGIQFDG
EETERLRRQSVLRTEVLPELTTTVVHEAKSSGLLPENLLELSNSTEDEYGILRIAAGLYA
QYEELMKTRDFIDYDDMILAALRVLNHPFTRRSEQNQVFAVFEDEAQDSSPLQTQLLEIL
ARDPNDEGIPPNIIRVGDPNQAINSTFTPADPIYFREFCEQCQQIQRLATMDCAGRSTHI
IIEAANYTLRWVNNFYGQKFQEAQPDSPPPTPFRNQIIHPLDPDDLQQNPAPQGKGLELY
VPYDIFHTVELISTRIVELLTTNRETNAAILVRENRQGRWMAAALAQICQDHDIPLYDAG
ERDRHSHIPSEILALLQFCDRPHSPDNLKAALTVLVQRQLIPTQDLNALAAQPEDFLYPT
PLTPPPSDSARIAARICRSLLRARMELPIYQLISFLALTLNYEQAELATADKLSERVNQQ
IAGNANMGTMLGVLGEIVSSERFEPVEEGNMEAKYTKTGQLTIITMHKAKGLDWDYVFIP
FLHENLIPGKSWIPPQFQFLGNFTLSEVARAQIRAALHGSQKLPDVGKAWEQAKYLKIAE
EYRLLYVAITRAKRLLWMSAAKKAPFTWSKPENLQEQAACPVFSALLKRFAEYQVNLPPR
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaccactgataaaattatcaaccccgatatccaaacccgattaactgcaagt
attgctctcttgcggcaaaaattgcggagtggacaacaacaaatggctgattgggtgggt
ggacagttagccgtatctgcggttcctggtgcgggaaaatcctatgggatggctgctgct
gctgctatcgcgatcgcgcgacaatatttagcggtggctaatagtggtcggtctgtatcc
cgtcggcagttggtggtagtaacttttacccgttcggcggcggcaaatattaaggcgaaa
attgcggaaaacctaaaaaaaatggctcttccccaaacgggttttgcggtttataccctg
cacggattagcattaaatattgctactcgccatccggatttgtccggtttggatttgaat
aatgccaccctgattacacccaatcaaagccatcgctttgtccggttagcggtggaaaaa
tggattgctagtcacccccaagcatatctgcggttgttggaggggatacagtttgatggg
gaggaaacggaacggttgcgtcgtcaatcggtgctgcggacggaggttttaccggaatta
acgacaactgttgtccatgaagccaaaagttctggtttattacccgaaaatttgctggaa
ctaagtaatagcacggaagatgaatatggaattttacgcattgctgccgggttatatgct
caatacgaagaactgatgaaaacgcgggatttcattgattacgatgatatgattttggcg
gctttacgggtattaaatcatcctttcacccgacgtagcgaacaaaaccaggtttttgcc
gtttttgaagacgaagcccaggattccagtcccctgcaaacccaattactggaaatttta
gcccgtgaccccaatgatgaaggtataccccccaatattatccgcgttggcgaccctaac
caagcaattaactccacctttacccccgcagacccaatttattttcgggaattttgtgaa
caatgtcaacaaatccagcgtttagcaacaatggactgtgcgggacgcagtacccatata
attattgaagccgcaaattataccctgcgctgggtcaataacttctatgggcaaaaattc
caggaagcacaaccagactctcctccccccacaccctttcgtaatcaaatcatccatccc
ctagacccggacgacctccaacaaaacccagcaccgcagggaaaaggattagaactgtat
gtaccctatgatattttccatacggtcgaattgatttccacacgcatagtagaactactg
acaaccaaccgagaaaccaatgccgccattttagtgcgggaaaatcgtcaaggtcgctgg
atggccgcagccttagcccaaatctgccaagaccatgatattcccctctacgatgccgga
gaacgcgatcgccattcccacattcccagtgaaattttagcactcctgcaattttgcgat
cgcccccattcccccgacaatctcaaagctgcactcacggttttagtccaacgtcaactc
atccccacccaggatttaaacgccctcgcagcccaaccagaggactttttatacccaact
cccctaactccaccccccagtgattctgcccgtattgccgcccgcatttgtcgtagttta
ctccgcgcgcggatggaattaccgatataccagttaatttcctttttggctttgaccctg
aactatgaacaagctgaactcgcgactgctgataaacttagcgaacgggtgaatcaacaa
attgctggaaatgccaatatgggaacaatgttgggtgtattaggggaaatagttagttcc
gagcgctttgaacccgttgaagagggaaatatggaagcgaaatatacgaaaaccggacag
ttaacaattatcaccatgcacaaagccaagggattggattgggattatgtatttatcccc
tttctccacgaaaatttgataccaggtaaatcctggatacctccccaattccaattcctc
ggtaattttaccctatcggaggtagcccgtgcccaaattcgagcagccttacacggaagt
caaaaattacccgatgtcggtaaagcttgggaacaagcgaaatatttgaaaatcgctgaa
gagtatcgattgttgtatgtggctattacccgtgcaaaacgtttattgtggatgtctgcg
gcaaaaaaagccccatttacctggagtaaacccgaaaatttacaagaacaagctgcttgt
cctgttttttcggctttattaaagcggttcgcagaatatcaggtcaatttgccaccaagg
tga
DBGET
integrated database retrieval system
