Calothrix sp. NIES-3974: NIES3974_08710
Help
Entry
NIES3974_08710 CDS
T09641
Name
(GenBank) TPR domain protein
Organism
cals
Calothrix sp. NIES-3974
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_1
TPR_10
CHAT
TPR_2
TPR_8
TPR_7
TPR_14
TPR_MalT
TPR_16
TPR_6
SNAP
TPR_NPHP3
DUF2225
RNPP_C
TPR_NUP160_120_M
TPR_11
Rapsyn_N
TPR_19
FliS
ARM_TT21_4th
Motif
Other DBs
NCBI-ProteinID:
BAZ04239
UniProt:
A0A1Z4NET4
LinkDB
All DBs
Position
1086437..1089928
Genome browser
AA seq
1163 aa
AA seq
DB search
MDSKLKMIHNQPNKEKLTHLFPHIIHYSIIASLSLFFSNQYVSARANITPLTIAQQPATN
QSDVTRVEADKLTQEGLQLYQQGTAESLIAARQKWESALVLWQKLGDKKAQATILLGIGR
VYSNLGEKSFSLKHYQQALNLYREIDDKGGEATVLNNMGTVYLNLGEIQKALSLFNQALT
LRQDQRSEAITLHNIGQAYNDLGEPQKALTYYNRALLLFRAVADKGMEANTLNSIGAVYS
YLGNQQTALQYLNQALPLRREVKDKSGEASTLSNIGKVYFDLGEKQRALDYFQQALSLGQ
LVGDREGQATSLGNIGSVYSDLGEKQKALDYHNQALSLRRIIGDRVGEANSLNNLGAVYS
DLGEKQKAIEFYQQALSISRQVSDRYLEATTLNNIGFVYSGWGENEKALSLYSQALGIFR
QIAHKSGEVSVLNGLGLVYSDLGENQKALEFYHQALSISRQIVNQDLQATTLNNIGLVYS
NLGEKQKALSYYNQVLPIFRAISHKGGEANTLVNIGAVYLDLGEEQKALSYYNQALPVLR
VVSDKAKEGNALNNIGLVYFQLGEKQKALSYFNQALPLHREVGDRDGEAIIYWNLANLER
KQGNLQASLQHIETAIQIIEQLRDTYTNQDLKTRYFATVQNYYKFHIDLLMELNKKNPGK
NYNVLALNTSERSRARILLELLAQSQVKLRKNTDPQLLAQEQELQLKRQAQEKILAELIN
QKKPSPETIKKTETEIQNIINQQKNLQAKIRAQNPERDQITNPQPLTLPQIQQQLDKDTV
LLQYSLGKDRSFVWLITPTSMTSYELPKEAEISKIASDLHQNLGQSAASTDLAINAAQKL
SQLILAPVQDKIAGKRLVIVADGILQQIPFAALHNPCRDVTCHVSTKMTTYQPLFLNHEI
VNLPSASTIAIQRQKTTNRKPAPKKLAILADPVYSHDDERVTGKPAPLAPELELERSALK
RSAQSLNRNGWRRLPYTGTEAQAILKLFPPTSSLPAFDFDANYNWATSKALNQYQIIHFA
THGFVNPDQPELSGLVLSLVDKNGKQIPGYLRLADLFEQDYPAELIVLSACETGLGKNVS
GEGLVGLTRGLMYAGAARVALSLWQVNDEGTSVLMQEFYKQMLEGNLTPPQALRAAQKKL
WQESSQWRSPHYWAAFTLQGEWR
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggattcaaaattaaaaatgatacacaatcaaccgaataaggaaaaactcacccattta
ttcccacatattatacattacagtattatcgcctcccttagcctatttttctccaaccaa
tatgtgagtgccagggcaaacattaccccgttaacaatcgcacaacaacccgcaactaac
cagtcagatgtaacccgtgtagaagcagataaattaacccaagaaggattgcaattatac
caacaaggaacagcagaatccctcattgcagccagacagaaatgggaatcagccctagtt
ttgtggcagaaattgggtgataaaaaagcacaagcaacaattttgctgggtattggtcga
gtctactccaacttgggagaaaaatcattcagcctgaaacactatcagcaagctttaaac
ttgtatcgtgaaatagatgataaaggtggagaagcgacagtactcaacaatatgggtaca
gtttacttaaatttaggagaaatacaaaaagcactttctttgtttaatcaggctttaact
cttcgtcaagatcaaagaagtgaagccattaccctgcataatattggtcaagcctacaat
gacttgggagaaccccaaaaagccctcacatattacaatcgcgctctacttctattccgt
gcagttgcagacaaagggatggaagcgaatactctcaatagtattggtgcagtttattcc
tatttaggaaatcaacaaacagcactgcaataccttaaccaagctttacccctgcgtcgt
gaagtcaaggataaaagtggggaagcttctactttgagtaatattggtaaagtttatttc
gatttgggagaaaaacaaagagcgcttgactattttcagcaagctttatctttaggtcag
cttgtcggggatagggagggacaagctacaagtttaggtaatattggttctgtttactcc
gatttaggagaaaaacaaaaagcacttgactaccacaatcaagctttatccctcagacgt
attattggggacagggtgggggaagctaatagcttgaataatctgggtgcagtttactct
gatttaggtgaaaagcagaaagcaattgagttctatcaacaagctttatcgatatcgcgt
caagttagtgatagatatttggaagctaccaccttaaataatattggttttgtctactcg
ggttggggagagaacgagaaagccctttctttatatagtcaagctctagggatattccgt
caaattgctcataaaagcggggaggtttcagttctcaacggtttaggtttagtttattca
gacttaggagaaaatcaaaaggcactagaattttatcaccaagctttatccatatctcgt
caaattgttaatcaagatttgcaagctaccactctcaataatattggtttagtctactcg
aatttaggagagaagcaaaaagcactttcctactacaaccaagttttacccatctttcgt
gcaatttctcacaaaggaggagaagctaataccctggttaatattggtgctgtctacttg
gatttaggggaagagcagaaagcactttcctactacaatcaagcattaccagtactacgt
gtagtttccgacaaggctaaggaaggtaatgccctcaataatatcggtcttgtctatttt
cagttaggggaaaagcaaaaagcgctctcttacttcaaccaagccttacctttacaccgt
gaagtaggagacagggatggggaagccataatctactggaacctagcaaacctggaacgc
aaacaaggtaatctccaagcatccctccaacacatcgaaaccgccatccaaattatcgaa
caactccgcgacacctacaccaaccaagacctgaaaacccgatatttcgccaccgtccag
aattactacaaattccacatcgacctgttgatggaactgaacaagaaaaacccaggtaaa
aactacaacgtcctcgccctcaacacctctgaacgctcccgcgctcgtattttactggaa
ctcctagcccaatcccaggtcaaactccgtaaaaacactgacccccaactcctcgcccag
gaacaggaattacaacttaaacgccaagcccaggaaaaaatcctcgccgaattaatcaac
caaaaaaaaccatccccggaaaccatcaaaaaaaccgagacagaaattcaaaatatcatc
aatcaacaaaaaaacctccaagccaaaatccgcgctcaaaacccagaacgggaccaaatc
accaacccccaacccctcaccctaccgcaaatccaacaacaactcgacaaggacaccgta
ttactccaatactccctagggaaagaccgcagctttgtatggttaatcacccccacctcc
atgaccagctacgaactacccaaggaagcagaaattagcaaaattgccagtgatctgcat
caaaacttaggacaatcggctgcatccaccgatttagccattaatgctgctcaaaaactc
agtcaactcatccttgcaccagtgcaggataaaatcgcgggtaaacgattagtcatcgtc
gccgacggtattttacaacaaatccccttcgccgcattacacaacccatgtagagacgtt
acatgtcacgtctctacaaaaatgacgacctaccaacccctattcctcaaccacgaaatc
gtgaatttaccctccgcatcaacaatcgccatccaacggcaaaaaaccactaaccgcaaa
cccgcacccaaaaaactcgccatcctcgcagacccggtatacagtcacgacgatgaacgt
gtcaccggaaaacccgcaccccttgcaccagaactagaactggaacgttccgctctcaaa
cgttccgctcaaagcctcaatcgtaatggctggagacgattaccctacacaggaacagaa
gcccaagccattctaaaactcttcccaccaacctccagtttaccagcctttgatttcgat
gctaactacaactgggctaccagtaaagccctgaatcaataccaaattatccactttgcc
acccacggtttcgtcaatcccgaccaaccagaattatcaggacttgttctctccctagtg
gacaaaaacggcaaacaaatccccggttatctacggttagcagacctgtttgaacaggat
taccccgcagaattaatcgtcttgagtgcctgtgaaactggactaggtaaaaacgtcagt
ggtgaaggattggtggggttgacaaggggactaatgtatgcaggtgcagcacgggtggct
ttatccttgtggcaggtgaatgatgagggtacatcggtattaatgcaggagttttataaa
cagatgttggaggggaatttgacaccaccccaagccttgcgagcggctcagaaaaagcta
tggcaagaaagttcccaatggcgtagtccccactactgggcagctttcacgttgcagggg
gaatggcggtga
DBGET
integrated database retrieval system
