Calothrix sp. NIES-3974: NIES3974_08960
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Entry
NIES3974_08960 CDS
T09641
Name
(GenBank) binding-protein-dependent transport systems inner membrane component
KO
K11071
spermidine/putrescine transport system permease protein
Organism
cals
Calothrix sp. NIES-3974
Pathway
cals02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cals00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NIES3974_08960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cals02000
]
NIES3974_08960
Transporters [BR:
cals02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
NIES3974_08960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
DOG1
Motif
Other DBs
NCBI-ProteinID:
BAZ04263
LinkDB
All DBs
Position
complement(1121663..1122649)
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AA seq
328 aa
AA seq
DB search
MTTQLPLNSYPENGEVKHPVNKRRVKLLEPLLLLAPAGFWLLLMLVLPTLIIFQLSLVPG
IRPGELVNPGGVSSFWEFILRWGEDGYLRRVWFALTENYRRILDPLFLQVIWRSLILAAS
TSIICLLLGFPVAYWITQIAPKRWRTLLLLGFVLPLWTSSLLRTYAWITILRPSGLLNLV
LNNFGLPSLQILDTLPAVVIGMSYSLLPYMVLILYASLEKLDTRLLEAAADLGANPFQAF
WRVTIPQVRTGIFAGGFMVLITALGDFVNPELLGGVSSMTAARLIYTQFLGASKNWGFGS
ALSMTLIFAVSIAIALLIKFGDTSVRSK
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
gtgactacccaattaccccttaattcctatccagaaaacggcgaagtgaaacaccctgtc
aataaaagacgggtgaaattgctagaacctcttttattgctagcaccagctggtttttgg
ttgctactcatgttggtattaccaaccctaattatttttcaattaagtttagttccgggg
attcgtccaggtgaactagttaaccccggtggtgtatccagtttttgggaatttatactc
cgatggggtgaggatggttacttaagacgggtatggtttgcactgacggaaaattatcga
cgcattcttgacccactttttttacaagttatttggcgatcgctgattttagctgccagt
acgtctataatttgtttattgttgggctttcccgtggcttattggattacccaaatcgct
cctaaacgttggcgaacactgctattattaggtttcgtcctccctttgtggacttcctcc
ctgctgcgtacctatgcctggattacgattttacgcccctccggcttgctaaatttggtt
cttaacaacttcggattaccatcgctccaaattctcgatactttacctgcggtggtaatt
ggtatgagttatagtttactaccctacatggtactaattttgtacgcatccctggaaaaa
ctagataccagacttttagaagctgcggctgacttaggagcaaatccgttccaagctttt
tggcgagttaccattccccaggtgagaacagggatttttgcagggggatttatggtatta
attacagccttgggagactttgttaatccggaattactcggaggtgtatctagtatgacc
gcagctcgattaatttatacccaatttctgggtgcaagtaagaattggggttttggttca
gccttaagtatgactttgatttttgcagtgagtatagcgatcgcgctgttaattaagttt
ggggataccagtgtaaggagtaaatga
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