Calothrix sp. NIES-3974: NIES3974_09860
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Entry
NIES3974_09860 CDS
T09641
Name
(GenBank) recombination and DNA strand exchange inhibitor protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
cals
Calothrix sp. NIES-3974
Pathway
cals03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cals00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NIES3974_09860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cals03400
]
NIES3974_09860
DNA repair and recombination proteins [BR:
cals03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
NIES3974_09860
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
Alp7A_like_C
TssO
DUF1054
FPP
Motif
Other DBs
NCBI-ProteinID:
BAZ04348
UniProt:
A0A1Z4NF47
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Position
1228405..1230828
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AA seq
807 aa
AA seq
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MIQSETLELLEWSRLCQHLSNFAATKLGVFAARNIQIPTTLTASEQLLKQTQQVYDLEGR
TPTGLSFEGIQDIGDSLERAELKGLLAGDELLAIATTLAGARNLRRTIENHEDLDVLLAL
VADLRTYPEVEQEIHRCIDERGHVADRASSKLAEVRSEIRRVRSQINQKLQNIIQVKSNA
LQEGIITQRGDRYVLPVKASHKDVIPGIVHDTSTSGVTLYVEPNSVVPMGNQLRQLLRRE
EVEEEAIRRALTGQIADIIPDLERLLAIITVLDLACARSRYSQWLKGNPPRFVDPTQEQI
TLRQLHHPLLLWQQQYEQGHPVVPVDLRIEPHIRVVTITGPNTGGKTVTLKTLGLAALMA
KVGLFIPAREPVEIPWFEQVLADIGDEQSLQQSLSTFSGHIRRISRILTAISPGESPEDQ
DLKSPSPSLILLDEVGAGTDPVEGSALAIALLRYLADHALLTMATTHFGELKALKYEDLR
FENASVEFDEATLSPTYRLLWGIPGRSNALAIASRLGLKPEVIAAAKQQMGGVTDDVNLV
IAGLEDQRRRQEIKAAEAQNLLQQAEKLYKEVSAKADALQEREQALKASQEAAVQEAIAQ
AKKEIAQVIRRLQQGTPTGQDAQNATNAINQIAEKFIPQAPPKPKPGYIPKIGERIRIPK
LGQTAEVLTAPDADREINVRFGIMKMTVKLDDIESLDGQKPEPSGKETKVKENKTKTESP
PAATEPLIRTSRNTIDLRGKRVADAEYILDQAIAQAHRAIWIIHGHGTGKLRQGVHEYLR
QHPRVSKYEPAEQADGGTGVTIAYIVD
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
ttgattcaatcagaaaccctagaattattagaatggtcgcggttgtgccaacatttgtca
aactttgcagcgacaaagttaggtgtttttgccgcgcggaatatacaaatacccacaact
ttaacggcaagcgaacagttacttaaacaaacgcaacaggtttacgatttagaaggacgt
acacctacagggttatccttcgaggggatacaggatattggtgattccctggaaagagct
gaattaaaaggactactggctggagatgaattactcgcgatcgctaccacattggcggga
gcgcgaaatttgcggcgaactattgaaaatcacgaagatttggatgttttactggctttg
gtggcggatttacgcacctatccggaggtggaacaggaaatccatcgctgtattgatgaa
cgaggtcatgtggcggatcgagctagtagtaagttggcagaagtacgtagcgaaatccgc
cgtgtgcgtagccaaatcaaccaaaagctccaaaatattatccaggtcaaatcaaatgcc
ctccaggaggggattattacccaacggggcgatcgctatgtacttccggtgaaggcttcc
cacaaagatgtgattcccggtattgtccatgatacttccaccagtggggtgacgctgtat
gtggagccgaattcggtggtgccgatgggaaatcaattgcgacagttgttacgacgggaa
gaggtggaagaggaagcaattcgtcgggctttaactggtcaaattgccgatattatcccc
gatttagaaagattactggcaattatcaccgttttagatttagcctgcgctcgttcccgt
tacagtcaatggttgaagggcaatccaccccgctttgttgatccaacccaggaacaaatc
accctgcgtcaactgcaccaccccctcctcctctggcagcaacaatacgaacaaggccat
cccgttgtccctgtcgatttacggattgaaccccatattcgtgttgtcaccatcaccggt
cccaatacgggggggaagacagtcaccctcaaaaccttgggattagcagccctaatggcc
aaggtgggtttatttatcccggctcgtgaaccggtggaaattccttggtttgagcaggtg
ttggcggatatcggcgatgagcaatccctccaacaaagtttatcgactttttccggccat
attcgccggattagtcggattttgaccgccattagtccgggggaatccccagaagaccag
gatttaaaatccccatccccctccctcattttactcgatgaggtgggggctggaaccgac
ccggtggaaggaagtgccctggcgatcgccctattacggtatttggctgaccatgctttg
ttaacaatggccacaacccactttggggaattgaaggcgttgaaatatgaggatttacgc
tttgaaaatgcctccgtcgaatttgatgaagcgaccctttcccccacctaccgtctattg
tgggggattcccggtcgttcgaatgccctggcgatcgcatctcgactcggattgaaacca
gaagtgattgcagcagcaaaacagcaaatgggaggtgtaactgatgacgtgaatttggtg
attgccgggttagaagaccaacgtcgtcgtcaggaaatcaaggcggctgaggcgcagaat
ttactacaacaagcagagaaattatataaagaagtatctgcaaaagccgatgccctccag
gagcgggaacaagccctcaaagcctcccaagaagcggcagtccaagaagcgatcgcccaa
gcgaaaaaggaaatagcccaggtgattcgccgtttacaacagggtacacccaccggtcaa
gatgcccaaaatgccaccaacgccatcaatcagatagcggaaaaatttataccccaagcg
ccaccaaaacccaaaccaggttatattcccaaaatcggggagagaattcgtatacccaaa
ctcggacaaacagccgaagtgttaacagcacccgacgcagaccgggaaatcaatgtccgc
tttgggattatgaaaatgactgtgaaactggatgatattgaatccctggatggtcaaaaa
ccggaaccaagtgggaaggaaactaaagtcaaagaaaataaaaccaaaaccgaatcaccc
ccagccgccacagaacccctaatacgtacatcccgaaataccattgatttgcggggtaaa
cgggttgctgatgccgaatatatcctagaccaagcgatcgcccaagcccatcgagccatc
tggattattcacggtcacggtacagggaaattacggcaaggggtgcatgaatatttacgt
cagcatccacgggtatctaagtatgaacccgccgaacaagctgatggaggaacgggggta
acaattgcctatattgttgattaa
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