Calothrix sp. NIES-3974: NIES3974_11400
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Entry
NIES3974_11400 CDS
T09641
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
cals
Calothrix sp. NIES-3974
Brite
KEGG Orthology (KO) [BR:
cals00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cals03009
]
NIES3974_11400
Enzymes [BR:
cals01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
NIES3974_11400
Ribosome biogenesis [BR:
cals03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NIES3974_11400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
BAZ04501
LinkDB
All DBs
Position
complement(1431192..1431938)
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AA seq
248 aa
AA seq
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MGSVVTIVLSAGSYILEIQIHPGIQIMSAQYRYIAFYKPYGVLCQFSQDTPERLTLKDFI
DVPNVYPVGRLDWDSEGLVLLTNHGQLQHRLCHPQFAHQRTYWVQVERLPSESALQQLRD
GVEIQDYRTKPAQVQLLSDVPDLPPRIPPIRDRKTVPTAWLEITMTEGKNRQVRRMTAKV
GFPTLRLVRVRIDVLGLTGLQPGQWRDLTPTEVKAVTGSVFDFPTSSLKNQSNRQATGKS
KFSRIVAK
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggggtcggtagtgacaattgtcttgagtgcaggttcctacatccttgaaattcaaatc
cacccagggattcagattatgtcggctcaataccgctatattgctttctataaaccctac
ggtgtgttgtgtcagtttagtcaagacacaccggaacgtctcaccttgaaggattttatt
gatgttcccaatgtttatccggtgggaaggttggattgggatagtgaggggttggtattg
ttgacaaatcatggtcaactgcaacatcgtctctgtcatccccagtttgcccatcaacga
acctattgggtgcaagtggaacgtttacccagcgaaagtgctttacagcagttacgcgat
ggggtggagattcaagattatcgcactaaacctgctcaagttcaattactaagtgatgtt
cccgacctacctccacgcattcccccaatccgcgatcgcaaaactgttcccactgcttgg
ctagaaattaccatgactgaagggaaaaatcgtcaagttcgacgaatgactgcgaaagtt
ggttttcccactttacgtttagtgcgtgtccgaatcgatgttctgggtttaacaggatta
caacctggacaatggcgagatttgactccaacggaggtcaaggctgttactggttctgtg
tttgattttcctacatcatcactcaaaaaccaatccaatcgtcaagcaactggtaaatcc
aaattttcacgaatcgtagcaaaatag
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