Calothrix sp. NIES-3974: NIES3974_12150
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Entry
NIES3974_12150 CDS
T09641
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
cals
Calothrix sp. NIES-3974
Brite
KEGG Orthology (KO) [BR:
cals00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cals03400
]
NIES3974_12150 (radA)
DNA repair and recombination proteins [BR:
cals03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NIES3974_12150 (radA)
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
DUF7125
AAA_16
Lon_C
nSTAND3
nSTAND_NTPase5
AAA_22
AAA_14
GvpD_P-loop
NTPase_1
NACHT
ABC_tran
MCM
AAA_29
AAA_24
DZR
TIP49
AAA
SLFN-g3_helicase
DUF7129
AAA_5
Motif
Other DBs
NCBI-ProteinID:
BAZ04575
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Position
complement(1526043..1527596)
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AA seq
517 aa
AA seq
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MSKSRSIYVCTECGYESPQWFGRCPACGTYNSLEEEITIQSSTDVPSRGVGRWHGESTNS
KKSNKPPKPRASLKFDQISDRQVTRWESGYGELDRVLGGGVVPGSMVLIGGDPGIGKSTL
LLQVSSQLAQKYRILYVSGEESGQQVKLRASRLGVSPTTLGLENGNGKGKNSVQINQLEE
DDGQEPKNPTIESLDSDLYVLPETDLEEILREVDSLKPNLTVIDSIQTVFFPSLTSAPGS
VAQVRECTAALMKVAKHEDITMLIVGHVTKEGAIAGPKVLEHLVDTVLYFEGDRFASHRL
LRTVKNRFGATHEIGIFEMVENGLREVPNPSELFLGNRDDPAPGSAIVVACEGTRPIVVE
LQALVSPTSYPSPRRSTTGVDYNRLMQILAVLEKRVGIPMSKLDAYVASSGGLNVEEPAV
DLGVAIALVASFRDRIVDSSTVLIGEVSLGGQVRPVSQMELRLKEAAKLGFKRAIVPKGQ
KFPKLDIEITPVSKVIDAIIAAIPQQSLTEEDLRMEE
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaatctcgctcaatttacgtttgcactgaatgtggttatgaatccccccaatgg
tttggtcgttgtccagcttgtggtacctataattctctagaagaagaaattaccattcaa
tcctccactgatgttcccagtcggggagtaggtcgttggcatggggaatcgacaaatagt
aaaaaaagtaacaaaccccccaaacctagggcatccttaaaattcgatcaaatcagcgat
cgccaagtgacgcggtgggaatctgggtatggcgagttggatcgggtattgggtgggggt
gtggttcccggttcgatggtgttgattgggggagaccctgggattgggaaatctacctta
ttgttgcaggtatccagtcaactagctcagaagtatcgcattctctacgtatctggggaa
gagtcgggacaacaggttaagttacgtgcgtcccgtttaggtgtttcgccgacaaccctt
ggtttagagaacggcaacggtaaggggaaaaattcagtgcaaataaaccaacttgaagag
gacgatggtcaggaaccgaaaaacccaacgatcgagtccttagacagcgatttatatgta
ttaccggaaaccgacctggaagaaattctccgggaagttgattccctcaaacctaacctc
accgtcattgacagtattcaaaccgtattttttccctcgttaacttccgcaccaggttca
gtagcccaagtccgagaatgtacggcagctctgatgaaagtcgccaagcacgaagatatc
accatgttgatcgtcggacacgtcaccaaagaaggcgcgatcgccggaccaaaagtgtta
gaacacctagtggatacggtgttatattttgaaggagatcgattcgcttcccatcggtta
ttacggacggtaaaaaatcggtttggcgcaacccatgaaattggtatctttgaaatggtg
gaaaatgggttacgggaagtacctaaccccagcgaattatttttaggtaatcgggatgac
cctgcaccaggaagcgccattgtggtagcctgtgaaggaacccgtcccatcgttgtcgaa
ttacaagctttagtcagtcccaccagttacccttctccccgcaggtcaacgacaggtgtg
gattataaccggttgatgcagattctggcagttctcgaaaagcgggtggggataccgatg
tcgaaattagatgcttatgtagcatcatcggggggattaaacgtagaagaaccagccgta
gatttaggtgtagccattgccttagtcgctagttttcgcgatcgcattgtcgattccagt
accgtgttaattggtgaagtcagtcttggtggtcaagtacgaccagtgtcacaaatggaa
ctacggttaaaggaagccgctaaactgggatttaaacgcgccattgttcctaaagggcaa
aaatttcccaaactagacatcgaaatcacccccgtatccaaggtcattgatgccattatt
gccgctattcctcaacagtcgctgacggaagaagatttgcgaatggaagaatag
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