Calothrix sp. NIES-3974: NIES3974_12670
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Entry
NIES3974_12670 CDS
T09641
Name
(GenBank) DNA topoisomerase chain A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
cals
Calothrix sp. NIES-3974
Brite
KEGG Orthology (KO) [BR:
cals00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cals03032
]
NIES3974_12670
03400 DNA repair and recombination proteins [BR:
cals03400
]
NIES3974_12670
Enzymes [BR:
cals01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NIES3974_12670
DNA replication proteins [BR:
cals03032
]
Prokaryotic type
DNA Topoisomerases
NIES3974_12670
DNA repair and recombination proteins [BR:
cals03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NIES3974_12670
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-ProteinID:
BAZ04624
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Position
1590102..1592612
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AA seq
836 aa
AA seq
DB search
MAKQLNLIPSGQVITTALHTEMQRSYLEYAMSVIVGRALPDVRDGLKPVHRRILYAMHEL
GLTPDRPYRKCARVVGDVLGKYHPHGDQAVYDALVRLVQDFSSRYPLLGGHGNFGSVDND
PPAAMRYTETRLAPVSHEGMLAEIGEETVEFIPNFDNSQQEPTVLPAQLPFLLLNGCTGI
AVGMATNVPPHNLGEIVDGLVALIDNPELSDDKLFELIPGPDFPTGGEIVGDGGIRDAYR
TGRGSITLRGIAQIEEIAGSRGSKRRTAIVVTELPYQVNKAGWIEKVADLVNQGRLVGIS
DIRDESDREGMRVVVELKRDTNPDEVLHHLYQQTALQVNFGAILLALVDGQPRQLSLREL
LQEFLNFREATLNRRYRYELGKAENRLHLLEGLLTALKNVDRLIEILRQSADGSSAKITL
QNELQLSETQADAILAMPMRRLTGMEQQNLQREAAELATQIDLLRRLLSDRKELLKSLKK
DLRNLKRKFGDERRTRINLDVTPSRVQPKSSKSDDSQPAPTSTPSYFESAPEDVVLEFTH
RGYVRRLSPNRKSKTEPLSENDAIIQTIATATDKELIIITNGGKAYPLKVAEIPPSTGRN
SRGTPLVTLLSSTVQESQETILTRFLLPDNAETQTMILATKQGRIKRISLAELTSLSKRG
ITLIKLKDEDELISTQFVSSNMQLILASSSGRMLRMTIHDDELPIMGRNAIGVQGLRLGK
QQHLVGCIAINPQQSILLVTEEGQAKNIPVLQIPISQRGSLGAQILRFNKTDYLAGIIPS
NFREIALISNQQRLIRMETVSIPVTNKDAKGQPITELNRDERITSIIGLASSTSTT
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacagttaaaccttatcccttcgggtcaggtcatcaccactgcgctgcatacg
gagatgcaacgttcatatttagagtatgccatgagtgtcattgttggtcgggctttaccg
gacgtacgcgatggcttgaaacctgtacaccgacgcattttatatgcgatgcatgagttg
gggttgacacctgatcgtccctatcgtaagtgtgcgcgggtggtgggggatgttctcggt
aaataccatccccacggcgaccaagcagtatatgatgccttggtgcggttagtccaggat
ttttctagtcgttatcccttgttggggggacacggaaatttcggtagtgtggataatgac
ccaccagcggcgatgcgttatacggaaacccggttagcacctgttagccatgaggggatg
ttggcggagattggtgaagagaccgtcgaatttatcccgaattttgataattcccagcag
gaaccgaccgtattacctgcccaattaccatttttgttattgaatggttgtacggggatt
gcggtggggatggcgacaaatgtccccccccataatttaggggaaattgttgatggtttg
gtggctttaattgataatccggagttaagtgacgacaagttatttgagttaattcccgga
cctgattttcccactgggggagaaattgtcggtgatggcggtattcgtgacgcttatcgg
actggacgtggtagtattactttgcgcgggattgcccagattgaggaaattgctgggagt
cggggtagtaaacggcgaaccgcgattgtggtgacagaattgccctaccaggtgaataag
gctggttggattgaaaaagttgctgatttggtcaatcagggacgattagtgggaatttcc
gatattcgggatgaaagcgatcgcgaaggaatgcgggttgtggtggaactcaaacgcgat
actaacccggatgaggttttacaccatctttaccaacaaaccgctctccaggtgaatttt
ggggcaattttattggcgttggtggatggacaaccccgtcagttaagtttgcgggagtta
ttacaggaatttttaaatttccgggaagccaccttaaatcgtcgttatcgctacgagtta
ggcaaggcggaaaaccgtttacatttgctggaagggttactaacggcgttaaaaaatgtg
gatcgattaatcgagattttgcggcaatcggccgatggtagttccgccaaaatcaccctg
caaaacgaattacaattaagcgaaacccaagctgatgccattttagcaatgcccatgcga
cgcttaaccgggatggaacaacaaaacctacaacgggaagccgcagaattggcaacacaa
attgatctactcagaagattattgagcgatcgcaaggagttactcaaatccctgaaaaag
gatttacgtaacctcaaacgtaaatttggcgacgaacgtcgtacccgaattaatttggat
gtcacccccagtcgtgtccagccaaagtccagcaaatcggatgattcccaaccagccccc
actagcacccccagctattttgaatccgcccctgaagatgtagtattagaatttacccat
cgcggatatgttcgtcgcctatcacccaaccgcaaatcgaaaaccgaacccctcagcgaa
aatgatgccattatccaaaccatcgcgacagcaactgacaaagaattaattatcatcacc
aatggaggaaaagcttacccgttaaaagttgccgaaatccccccctccacaggtcgcaat
tctcgcggaactcccctagtcaccttgttaagtagtacagtccaggaatcccaggaaacc
atccttacccgatttttgctaccagacaatgccgaaacccaaaccatgattttggccacc
aaacagggtcgcattaaacgtattagtctcgcggaactgactagtttaagcaaacgggga
atcaccctcatcaagctgaaagacgaagacgaattaatcagcacccaatttgtatccagt
aacatgcaactaattctagccagttccagtggtcgcatgttacgcatgaccatccacgat
gatgaattacccattatgggacggaatgctattggagtacagggtctgcgacttgggaaa
caacaacatttagtcggttgtattgcgattaatccccaacaatccatcctcctagttacc
gaagaagggcaagccaaaaatatcccggttctgcaaatccccatttcccaacggggtagt
ctgggtgcgcaaattctcagattcaacaaaacggactatttagcaggaattattcctagt
aatttcagggaaattgccctcatcagcaatcagcaacgtctgatacggatggaaactgta
tctatccctgttacaaataaggatgctaaaggtcaacccattaccgaactcaatcgtgac
gaacgcattaccagcataattggtctagcttcatccacatcgacaacttag
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