Calothrix sp. NIES-3974: NIES3974_12950
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Entry
NIES3974_12950 CDS
T09641
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cals
Calothrix sp. NIES-3974
Brite
KEGG Orthology (KO) [BR:
cals00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cals03016
]
NIES3974_12950 (truB)
Enzymes [BR:
cals01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NIES3974_12950 (truB)
Transfer RNA biogenesis [BR:
cals03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NIES3974_12950 (truB)
Prokaryotic type
NIES3974_12950 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
BAZ04652
UniProt:
A0A1Z4NG06
LinkDB
All DBs
Position
complement(1620727..1621593)
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AA seq
288 aa
AA seq
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MNGFINLNKPVNWTSHDCVAKVRKILRTKKVGHGGTLDPAATGVLPIAVGKATRLLQYLP
GDKAYLGTIRFGVQTTTDDLEGDVIASQSCGDLSLSQIESLIGNFIGDIRQIPPSYSAIQ
VDGKRLYELARKGEIVEVPGRNVQVFTIDILDWRSGEYPELDIHISCGAGTYIRAIARDL
GYACGQVATLAKLQRTVSSGFHLADSITLEDLQTQVDAGNFQPLPADFPLQYLPSIHLDP
DFAIKWCHGQKIPYETQTEGLLRVYEKHDFLGIARVEAGLLIPKMVFV
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaatggctttatcaatctcaataaacccgttaattggacttcccacgattgtgtggcg
aaggtgcgcaaaattctccgaactaaaaaagtcggtcatgggggaacccttgacccagct
gcgacgggggtgttaccaattgcggtggggaaggcaactcgattgttacaatatttacca
ggtgataaagcctatttgggaaccattcgctttggtgtacaaacaacgacggatgattta
gagggggatgtgattgcttcccaatcctgtggggatttaagtttgtcacaaattgaatca
ttgataggtaattttattggtgatattaggcaaattcctcccagttatagtgccattcag
gtggatgggaaaagattgtacgaactagctcgtaagggtgaaattgtcgaagtacctggg
agaaatgtccaagtatttaccattgatattttagattggcggagtggggaatatccggaa
ctagatatacatatatcctgtggtgcgggaacctatattcgagcgatcgctcgtgatttg
ggttatgcttgtggtcaggtcgcgactctagcaaagttacaacgcaccgttagtagtggt
tttcatctggctgatagtattactctggaggatttacagacccaggtggatgctggaaat
tttcaacctttacctgcggactttcccttacaatacctaccctcgattcaccttgacccc
gatttcgccatcaagtggtgtcatggtcaaaaaattccctacgaaacgcaaactgaaggg
ttgttgcgagtttatgaaaagcatgattttttgggaatcgcgcgggtggaagctggtttg
ttaatcccgaagatggtatttgtttga
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