Calothrix sp. NIES-3974: NIES3974_19810
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Entry
NIES3974_19810 CDS
T09641
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
cals
Calothrix sp. NIES-3974
Pathway
cals02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cals00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NIES3974_19810
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cals02000
]
NIES3974_19810
Transporters [BR:
cals02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
NIES3974_19810
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_8
Motif
Other DBs
NCBI-ProteinID:
BAZ05334
UniProt:
A0A1Z4NHY2
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All DBs
Position
complement(2445721..2446917)
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AA seq
398 aa
AA seq
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MRRREFLHSATAVAIAQFLTGCGNNQNAFRVELLKGSLPGQLINRFQRSWQSQQQVKLQV
SPLRRVEDAFTHLQNWRFRDQLPQPDNLWTRMRQLPVVGEPPTPVANLVSIPDYWLQAAI
QQKLIQAIDVSKLQQWSNLAPKWQQLVTRDDQGFVSPQGKIWAAPFRWGTTVIVYRRDQF
ARNGWNPPRDWDDLWRPELRDRISLLDHPRETIGLVLKKLGKSYNTTTEDLNSIPNLKTE
LSQLHQQTKFYSSDRYLEPLIIGDTFMAVGWSNEVIPLITSDPRFAAIVPQRGTALWADL
WVIPYQHHPSTSSQSAGHGEWIDFFWNQENARQLTIGSKVSTPIPTQIQPNDIPQNIANL
LIIDPNIIKNSELILPLPAKVTRHYFEFFNQIKQQKLV
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgaagggaatttttacatagtgcgactgctgtagcgatcgctcaatttttaact
ggttgtggcaataatcagaatgcatttcgggtggagttactcaaaggttcccttcccggt
cagttaattaatcgatttcaacgcagttggcaaagtcaacagcaggtcaaattacaagtg
tctcccctgagaagggttgaggatgcttttactcacctgcaaaattggcgttttcgcgac
cagctaccccaaccagataatctctggactcgaatgagacaattacctgtggtgggagaa
cccccaactccagttgcaaatctagtgagtattccagattactggttacaagctgccatt
caacaaaagttaattcaagccattgatgtcagtaaacttcagcagtggtctaatttagca
ccaaaatggcaacaattagtcaccagggatgatcagggatttgtctctccccaaggaaaa
atatgggctgctccttttcgctgggggacaacggtaattgtctatcgtcgtgatcaattt
gcacgtaatggctggaatcccccccgtgattgggatgatttatggcgaccggaattgcgc
gatcgcatttccctccttgaccatccccgcgaaaccatcggcttggtactgaaaaagctg
ggtaaatcctataacacaaccacggaagacctcaactctattcccaatctgaaaactgaa
ctcagccaactccatcagcaaacaaaattttactccagcgatcgctatctggaaccttta
attattggcgatactttcatggctgttggttggtcaaatgaggtgattcctctgattacc
agcgacccccgatttgctgccattgtaccccaaaggggaaccgctctctgggctgattta
tgggtaattccctatcaacatcatccatccacatcatcccaatctgctggacatggagaa
tggattgactttttctggaaccaagaaaacgctcgccaacttaccatcggttctaaagtt
agtacccccattcccactcaaattcaacctaatgatattccgcaaaatattgcgaatttg
ttaatcattgaccccaatatcatcaaaaatagcgaattaattttaccactaccagcaaag
gttactcgccattactttgaattttttaaccaaatcaaacagcaaaaattagtttga
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