Calothrix sp. NIES-3974: NIES3974_20490
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Entry
NIES3974_20490 CDS
T09641
Name
(GenBank) cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
cals
Calothrix sp. NIES-3974
Pathway
cals02010
ABC transporters
cals03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
cals00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NIES3974_20490
03070 Bacterial secretion system
NIES3974_20490
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cals02000
]
NIES3974_20490
02044 Secretion system [BR:
cals02044
]
NIES3974_20490
Transporters [BR:
cals02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NIES3974_20490
Secretion system [BR:
cals02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
NIES3974_20490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
cNMP_binding
Peptidase_C70
SMC_N
Peptidase_C39_2
AAA_22
RsgA_GTPase
AAA_29
nSTAND3
NB-ARC
AAA_30
TsaE
AAA_16
DsbD_2
Motif
Other DBs
NCBI-ProteinID:
BAZ05401
UniProt:
A0A1Z4NI85
LinkDB
All DBs
Position
2521293..2524370
Genome browser
AA seq
1025 aa
AA seq
DB search
MTTVFYLPDTGEKLISILGENLSEQDLQTCLTGMEVVEPSVTKQFWESSQNHPGIYMILT
GKVRLSDSFDHLITTLSAGSSFGEMTLFPQENFIPYSARASNNLKLGYFPQELLQSLIHK
YPPIQQHLFTRAELWDLLLLCRQNSQFPPHVSQVEGFLQALSLFERHDLVNSVDTLLNSE
TKLWVLRQGELQDSDGNSLRPGNIYSQLHLGNWRVKETAIAYILNQGNYQLARKYCPSLA
LFFDPQESLEATVNLPRRRPTKKVEQLETPGKIIAFPQKTPETKPKPQKSRPYFPGPKVQ
MGHWWGRLTKRYPFYAQQSASDCGCASLVMIGRYWGKNFSVNRLRDMTNVGRSGASMSAI
AAAAESLGFASRPVKATLDKLAEQPLPAIAHWEGNHFIVIYAITKTKVIVCDPAIGQRTL
TRKQFVAGWTGYALLLQPTSLLKNTENQDVGLWKFFELVKPHYKVLIEVFVASVLIQLFG
LVTPVFTQLLLDRVLVQRSLATLNAVGLGMIVFGLFSIVMNAVRTYLLSHTANRISISLL
VGFIKHTFRLPLAYFESRYVGDIISRIQENQKIQSFLTGQALSIILDMLTLVVYLTLMFS
YSWQMALFVLATVPPFFILALASTSILRRISREVFNSGAKENSYIIESLTGIRTVRSLAI
EQTVRWHWEELLNDLVRKAFNAQVIGIRLSVISGAINTFTSAALMWFGAWQVIQGQLTVG
QLVAFNMLVGNVLSPFQRFSQLWNEFQEIIISVERLNDVLEAEPEEDLHHKPRKTLGKLR
GHIRFENVTFRYHPESKTNVLENINFEIKPEQMVALVGRSGSGKTTLSKLILGLYPATDG
KVLIDGHDVNGLSLRSLRSQVGVVDQDTFLFGGTIRENISIAHPEATLDEIIQAAKLAGA
DEFIQKLPLGYDTQIGEGGGMLSGGQRQRLAIARALLGNPRLLLFDEATSHLDSESERII
QNNLKTILKGRTSVIIAHRLSTVRHADLILVLDQGVLVESGTHDELIAKQGHYYYLNQQQ
LAQVE
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagtcttttatctaccagatacgggtgaaaagctcatcagtattttgggagag
aacctctcggaacaagacctacaaacctgtttaacaggaatggaagtagtggaaccgtcg
gttacgaagcaattttgggaatcttcccagaatcacccaggtatatacatgattttgacg
ggtaaagtccgactttcagatagttttgatcatttaattacgaccttatctgctgggtct
tcctttggagagatgaccctatttccccaagaaaactttattccctatagtgctagagct
tccaataatttaaagctgggatatttcccccaagaattgctgcaatcattaatacacaaa
tatccccccattcaacaacacctatttacccgcgcagaactgtgggatttgttattatta
tgtcgccaaaattcccaatttcctccccatgtgtcccaggtggaaggatttctccaagct
ttatcattatttgaacgtcacgatttagttaattcagtagatacactgctgaattcagag
acaaagttgtgggtgttacgtcaaggtgaactacaggattctgatgggaactctttgaga
ccaggtaatatatacagccaactacatctgggaaattggcgagttaaagagactgcgatc
gcctatattcttaatcaaggtaattaccaattagctcgaaaatactgtccttcattagca
ttattttttgatccccaggaatccctggaagcgacagttaaccttccccgtcgcagaccc
accaaaaaagtagaacagttagaaactccagggaaaattattgcctttccccaaaaaact
ccagaaaccaaaccaaaaccccaaaaatcacgtccctacttccctggaccaaaagtgcaa
atgggtcactggtggggaagattaactaaacgttatcccttctacgctcaacaaagtgct
tccgattgtggttgtgcttccttagtcatgattggtcgctattgggggaaaaacttcagt
gtcaatcgcttacgggatatgaccaacgtcggtcgtagtggagcttccatgagtgcgatc
gccgcagcagctgaaagtttaggttttgctagtcgtcccgtcaaagccactctagataaa
cttgcggaacaacccctacctgcgatcgcccattgggaaggaaatcacttcatcgttatc
tatgcaatcactaaaacaaaagtaattgtttgtgaccctgcaatcggtcaacgtacccta
actcgtaagcaattcgtcgctggttggacaggatacgcattacttttacaacccacatct
ctcctgaagaatactgaaaatcaagatgtgggtctatggaaattttttgagctagtcaaa
ccccattacaaggtactcattgaagtgtttgtggcttcagtgttgatccagttatttggt
ttagtaacaccggtttttacccaattactgctggatcgagttcttgtacagcgcagttta
gctaccctcaatgctgtcggtttggggatgattgtgtttggtttatttagcattgtgatg
aatgctgtgcggacatatctgctctcccatactgccaaccggattagcatctccctattg
gtaggttttattaaacatacttttcgcttacccctagcctattttgaatctcgttacgtc
ggggatattatttcccgcatccaggaaaatcagaaaatacagagttttttgactggtcaa
gccttgtccatcatccttgacatgctgaccctagtggtgtatttgactctgatgttttcc
tacagctggcaaatggccctatttgtcctcgcgacagttcccccattttttatcttggca
ctagctagcacgagtattttacgccgtatctccagggaagtttttaactctggtgccaaa
gagaacagctacattattgaatcactgacaggaattcgtaccgtccgttccctagccatt
gaacaaacagtacgttggcattgggaagaactactgaatgatttagtccgaaaagccttc
aatgctcaagttatcggtattcgcctctcagttattagtggagcaattaataccttcacc
agtgcagcactgatgtggtttggagcttggcaggtaattcaaggtcaacttaccgtcggt
caattggtagcatttaatatgttggtgggtaacgtgttgagtccattccaaagattttcc
caactgtggaacgaattccaagaaatcatcatctccgtcgaacgtctcaacgatgtcctg
gaagcggaaccagaagaagacctacaccacaaaccccgtaagactttaggaaaattgcgg
ggacatatccgttttgaaaacgttacctttcgttatcaccccgaaagtaaaacaaacgtt
ctggaaaatatcaactttgaaattaaaccagagcaaatggtagccctagtgggacgcagt
ggttccggtaaaaccacccttagtaaactgattttaggtttatacccggcgacagatggc
aaagtactgattgatggtcatgatgtgaacgggttatccttgcgatcgctccgttcccaa
gtaggtgttgtagaccaagatacatttctgtttggtggtactattcgggagaatatttct
atcgcccatccagaagcaaccctagatgaaattatccaagcagcaaaactagctggggct
gatgaatttatccaaaaactaccattaggctacgatactcaaattggtgaaggtgggggg
atgctttctggtggacaacgccaacgtttagctattgctcgtgctttgctgggaaatccc
cgcttgcttttatttgatgaagccactagtcatttagattcggaatcagagcgtattatt
cagaacaatctgaaaactattctcaagggacgcactagcgttattattgcccatcgtctt
tccacggtacgccatgctgacttaattttagttctagatcaaggtgtacttgtagaaagt
ggaacccacgatgaattaatcgccaaacaaggacattattattacctgaatcaacaacaa
ctagctcaagtagaataa
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