Calothrix sp. NIES-3974: NIES3974_24570
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Entry
NIES3974_24570 CDS
T09641
Name
(GenBank) pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
cals
Calothrix sp. NIES-3974
Brite
KEGG Orthology (KO) [BR:
cals00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cals03009
]
NIES3974_24570
03016 Transfer RNA biogenesis [BR:
cals03016
]
NIES3974_24570
Enzymes [BR:
cals01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
NIES3974_24570
5.4.99.29 23S rRNA pseudouridine746 synthase
NIES3974_24570
Ribosome biogenesis [BR:
cals03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NIES3974_24570
Transfer RNA biogenesis [BR:
cals03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
NIES3974_24570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Ribosomal_S6
Motif
Other DBs
NCBI-ProteinID:
BAZ05802
UniProt:
A0A1Z4NJA5
LinkDB
All DBs
Position
3003907..3005544
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AA seq
545 aa
AA seq
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MEYLLTDFIPDIASIPDSSPSYYYQGYCVTTGELLRLPRTSLAEAIAKSLMQQLGTAPEY
NQEGKMYGVLIVESAKGQQRVLKAFSGLLNGCSQVPGWVPPIPGREEVVADEVEVLRKLE
AIRQEILELENIPQRQEYQDLQEQFSQKLLVLNQLHQQRKQQRHQQREKFLKTITGSQLD
QALAELADASCRDGIERKVLKKERDALIIPLQEIIRQADQKIHTLKQQRKQLSRQLQTQM
HATYTLMNFLGQSQTLQQLQPSGLPTGTGDCCAPKLLHYAAKRGFKAIAMAEFWWGQPTS
DKIPGNFYGACVERCQPIMGFLLSGLNAVSSSHHLEVIYEDEFLIAINKPANLLSVPGRY
LHTQDSVFSRIRNYYGDGNNFLAVHRLDFETSGILLIARHLDTYRQLSQQFQQRSVTKVY
EALLDGVVENVPGLKNPIELPLWGNPDNRPYQEVNWLWGKPSITYVHLVDIQNHLTRVEF
RPITGRTHQLRVHAVHPQGLGTAILGDQLYSPNSQYHRLCLHAREIEFIHPQFGEKVHLK
TPTPF
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggagtacttgctgacggattttattcctgatattgcctctataccggattcaagtcct
agttattattatcaaggatattgtgtaactactggtgaattattacgacttccccggact
agtttagcagaagcgatcgcaaaatcactaatgcagcagttaggtactgctccagagtac
aatcaggaagggaaaatgtatggtgtattaattgtcgaatcggcaaagggacagcaaaga
gttctcaaggctttctctgggttgttaaatggttgtagtcaggttccgggttgggttcca
ccaattcctggacgggaggaagttgttgcggatgaggtggaagtattacgcaagttggaa
gcgattagacaggaaattctggaacttgaaaatattccccaacgacaagaatatcaagat
ttacaggaacagtttagccaaaaactattagttctgaatcagttacatcaacaacgcaaa
caacaacgacatcaacaaagggaaaagtttttaaaaaccattacaggtagccaattagac
caagctttagcagagttagcggatgcaagttgtcgggatggaattgaacgtaaggtactc
aaaaaagaacgtgatgccctaattatacccttacaggagattatacggcaggcagaccaa
aaaattcacactttaaaacaacaacgaaaacaactttcgcgacaattacaaacccaaatg
cacgcgacctataccttgatgaacttcctgggacagtcgcaaacactccaacaacttcag
ccatcaggtttaccaacgggaacgggtgattgttgcgcacccaagttactccattatgca
gcaaaacgtggtttcaaagcgatcgcaatggcggaattctggtggggtcaaccaacttca
gacaaaatccctggtaatttttatggtgcttgtgtagaaaggtgtcaaccgattatgggt
tttctgctctctggattaaatgctgtttccagttcccatcacctggaagttatttacgag
gatgagtttttaatcgccattaataaacctgctaatttattatctgtaccgggacgctat
ttacatacccaagatagtgttttcagtcgaattcgtaattactatggtgatggcaacaat
tttttggctgttcaccgattggatttcgagacttcggggattttattaattgcacgtcat
ctcgatacctatcgtcaactaagtcaacaatttcaacaaagatcagtcaccaaagtttat
gaagctttacttgatggtgttgtggagaatgttccaggactgaaaaatcccattgaatta
ccattatggggaaacccagataatcgaccctatcaggaagttaattggttatggggtaaa
ccaagtattacctatgtccatctagtggatattcaaaatcacttaactcgcgttgaattt
cgaccgattactggaagaacacatcaattacgagttcacgctgtccatccccagggatta
ggtacggcaattttaggagatcaactctatagtccgaactcccaatatcatcgtctctgt
ttacatgcaagggaaattgaatttattcatccccaattcggtgaaaaagtacatttaaaa
accccaaccccattttaa
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