Calothrix sp. NIES-3974: NIES3974_24880
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Entry
NIES3974_24880 CDS
T09641
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
cals
Calothrix sp. NIES-3974
Brite
KEGG Orthology (KO) [BR:
cals00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cals03016
]
NIES3974_24880
Enzymes [BR:
cals01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
NIES3974_24880
Transfer RNA biogenesis [BR:
cals03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NIES3974_24880
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Phage_SSB
DUF7307
ARM_KNTC1_2nd
DUF1192
Motif
Other DBs
NCBI-ProteinID:
BAZ05833
UniProt:
A0A1Z4NJF2
LinkDB
All DBs
Position
complement(3039237..3040148)
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AA seq
303 aa
AA seq
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MPYLKTSPEIIATISRLKAATTLWIDTEVADFRTKKPKLSLIQVSDRPDDLSGEHIYILD
MLEKPDIVDIFIEQIMVEQNIEKVFHNASYDLKFLGGKKAQNITCTLEIAKKIPYYLLPV
ANYKLETLVTELCNYHDIDKSAQTSDWGFRPLSDGQLEYAYLDCIYLIQLHQRLIELATA
ANPQPETEDLSHLTARYQEISTQYKLLASEVEHLEERIKKVMQAQGIAETNIFKLTSYKR
TTTKVKFADLMRVVTSDNIDIDFPITLTQQLQAEIGESLAKMNPEIETSSSVRLSIKQTD
TDG
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgccctacttaaaaacatctccagaaattattgcaactatctccagattgaaagcagca
acaactctctggattgatacggaagtagcggatttccggacaaaaaagcctaaattatca
ttgattcaagtctccgaccggccggatgatttgagtggagagcatatttatattttagat
atgttagaaaaaccggatattgtggatatttttattgagcagattatggtagaacaaaat
atcgaaaaagtcttccataatgccagttatgatttaaaatttctcggtggaaaaaaagca
caaaatattacatgtacgctggaaattgccaaaaaaataccctattatttgcttccggtt
gccaattataaactggaaaccttagtcacagaattatgtaactaccatgatatcgataaa
tcagcccaaacaagtgattgggggtttcgtcccttgagtgatggacaactggaatatgcc
tatttagattgtatctatttaattcagttacatcagagattaatcgagttagcaacagca
gctaatcctcaaccagaaactgaagatttgtcccatttaacagccagataccaggagata
tccacccaatataagctgttagcatcggaagtagaacatctggaagagagaatcaaaaaa
gttatgcaagctcaagggatagcagagacaaatatatttaaattaacttcctataaacga
acaacaacaaaggtaaaatttgcagatttaatgcgtgttgtcaccagcgataacatagat
atagattttcccattaccctaacgcaacaactgcaagcagaaattggtgaatcccttgcc
aaaatgaatccggaaatcgaaacaagttcatccgtaaggttaagcatcaaacagacagat
acagatggataa
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