Calothrix sp. NIES-3974: NIES3974_26660
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Entry
NIES3974_26660 CDS
T09641
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
cals
Calothrix sp. NIES-3974
Brite
KEGG Orthology (KO) [BR:
cals00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cals03016
]
NIES3974_26660
03036 Chromosome and associated proteins [BR:
cals03036
]
NIES3974_26660
Transfer RNA biogenesis [BR:
cals03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
NIES3974_26660
Prokaryotic type
NIES3974_26660
Chromosome and associated proteins [BR:
cals03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
NIES3974_26660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C_1st
SAM_GIDA_C
FAD_oxidored
Pyr_redox_3
Pyr_redox_2
Pyr_redox
HI0933_like
FAD_binding_2
DAO
ThiF
Thi4
Motif
Other DBs
NCBI-ProteinID:
BAZ06009
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Position
3253204..3255147
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AA seq
647 aa
AA seq
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MHKSVEFQDEFDVIVVGAGHSGCEAALATSRLGCRTLLLTLNLDKIAWQPCNPAVGGPAK
SQLTHEVDALGGEIGKMADRTYLQKRILNSSRGPAVWALRAQTDKREYAAVMKNIVENQA
NLSIREAMVTDLVLGKNEEIIGVETYFGVAFACKAVILTTGTFLGGRIWVGNKSMEAGRA
GEFAAVGLTDTLNRLGFETGRLKTGTPARVDKRSVDYTKMELQPGDEEVRWFSFDPQVWV
EREQIPCHMTRTTAETHRLIRENLHLSPVYGGWVDAKGPRYCPSIEDKIVRFADKDSHQI
FIEPEGRDIPELYIQGFSTGLPENLQLQMLRSLPGLENCIMLRPAYAVEYDYLPATQCYP
TLMTKKVEGLFCAGQINGTTGYEEAAAQGLVAGINAARFVRSQELIIFPREQSYIGTLID
DLCTKDLREPYRMLTSRSEYRLLLRSDNADQRLTPLGREIGLIDDRRWQLYTRKQAQITA
EKERLHTTRVKEHDPVGQAIAQATQQAIKGSITLADLLRRPGFHYQDLLNYGLGNPELTR
DETEGAEIEIKYSGYLARQQNQIEQIARQGNRPLPSDLDYASIDTLSKEAREKLAKVKPL
TIGQAARIGGVNPADVNALLIYLEIRKNQSSPGVEATDATNLHEVRL
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaatcagttgaattccaagacgaatttgatgttattgtagttggtgcaggtcac
tccggttgtgaggcagcgctggcaacttctcgcctcggatgccggacgctgctactgacg
ttaaatctcgataaaatcgcttggcaaccctgtaatcccgcagtgggtggtccagctaaa
tcccaactcacccatgaagtcgatgctttaggtggggaaattggcaagatggctgaccga
acctacctgcaaaagcgtattttaaattcgtcacgaggtcctgcggtttgggctttgcgc
gctcaaactgataagcgagaatacgcggcggtaatgaaaaatattgtcgagaaccaagcc
aatttgtcgattcgtgaggcaatggtgacagacttggttttgggcaagaatgaggaaatt
atcggtgttgaaacctattttggtgtcgcttttgcatgcaaagcagttattctcaccacc
ggaacattcctgggtggacgcatctgggtggggaataaatcaatggaagctggacgagct
ggggaatttgcagctgttggcttgacagataccctgaatcggttgggatttgaaactggt
cggttgaaaactggtacaccagcacgggttgataaacgttccgttgattatacgaaaatg
gaactgcaacccggtgatgaggaggtgcgctggtttagttttgacccgcaagtgtgggtg
gaacgggaacaaattccctgtcatatgactagaaccaccgccgaaacccaccgattaatt
agggaaaatttgcatttatctcccgtatatggcggttgggttgatgctaaaggaccccgc
tattgtcccagtattgaagataaaatcgtccgttttgccgataaggacagccaccaaatt
tttattgaaccagagggacgggatattcccgaactctatattcaaggtttttccacgggt
ttaccggagaatttgcaattgcaaatgttgcgcagtctacccggtttagaaaattgtatt
atgctgcgtccagcctatgcggtggaatacgactatttgcctgcaacccaatgttatcct
accttgatgacgaaaaaggtggaagggttattttgtgctggacaaattaatgggacaacg
ggttacgaagaagcagcagcgcaaggtttggttgcggggattaacgctgcgagatttgtc
cgctctcaggagttgattatcttcccccgtgaacaaagttatatcggtacgctaattgat
gatttgtgtaccaaagacctccgtgaaccctaccggatgttaactagtcgctcggagtat
cggttattactacggtcggataatgcggatcagcggctaactcccctgggtcgggaaatc
ggtttaattgatgaccgtcgttggcaattgtacacccgcaaacaagcccagattaccgcc
gaaaaggaacgtttacacaccaccagagtcaaagaacacgacccagtgggtcaagcgatc
gcccaagcaactcaacaagcgataaaaggatcgattactctggcagatttattacgtcgt
cccggtttccactaccaggatctactgaactatggtctaggaaaccctgaattgacaagg
gatgagaccgaaggtgcggaaatcgaaatcaaatattccggctatctcgctcgtcaacaa
aatcaaatcgagcaaatcgcccgtcaaggaaatcgtcccctgccatcggacttagattat
gcatcaattgatacattgtcaaaggaggcacgggaaaaactcgcgaaggtcaaaccccta
acaattggtcaagcagcccgaattggtggggttaaccctgcggatgtgaatgcgttatta
atttacttagaaattcgtaaaaaccagtctagtcctggcgtggaggcaactgatgcaaca
aatcttcatgaagtgcgcttatag
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