Calothrix sp. NIES-3974: NIES3974_29210
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Entry
NIES3974_29210 CDS
T09641
Name
(GenBank) allophycocyanin beta subunit
KO
K02097
phycobilisome core component
Organism
cals
Calothrix sp. NIES-3974
Pathway
cals00196
Photosynthesis - antenna proteins
cals01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cals00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
NIES3974_29210
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
cals00194
]
NIES3974_29210
Photosynthesis proteins [BR:
cals00194
]
Antenna proteins
Phycobilisome - Cyanobacteria, Red alga [OT]
Allophycocyanin (AP)
NIES3974_29210
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phycobilisome
DUF1390
Motif
Other DBs
NCBI-ProteinID:
BAZ06263
UniProt:
A0A1Z4NKN7
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All DBs
Position
3544664..3545173
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AA seq
169 aa
AA seq
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MRDAVTSLIKNYDVAGKYFDRNAIDDLKKYFETGSARVQAAAVVNGNAAAIVKQAGLSLF
DELPELIRPGGNAYTTRRYAACLRDMDYYLRYATYAIVAGSMDVLDERVLQGLRETYNSL
GVPIAPTVRGIQIMKDIVKSQVEAAGISNSGFVDEPFDYMTRELSETDV
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgcgggacgcagttacgagtttaattaagaattatgacgttgctggcaagtacttcgac
cggaacgccattgacgacctgaaaaagtattttgagacaggtagcgcacgggtacaagct
gcggctgtagtgaatgggaatgcagctgcaatcgtcaagcaagcgggtttaagtttgttt
gacgaattgccagaattaatccgtcccggtggtaatgcctacaccacccgtcggtatgca
gcttgtttgcgggatatggattattacctgcgttatgccacctacgcaatcgtcgcaggt
agtatggacgtgctggatgagcgggttttgcaaggcttacgggaaacctataactccttg
ggtgtacctattgcccccactgtacgcggtatccaaattatgaaggatattgtgaaatcc
caagttgaagctgcgggtattagtaattccggtttcgttgatgaaccctttgattacatg
acccgcgaactcagcgagactgacgtttaa
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