Calothrix sp. NIES-3974: NIES3974_41420
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Entry
NIES3974_41420 CDS
T09641
Name
(GenBank) cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
cals
Calothrix sp. NIES-3974
Pathway
cals02010
ABC transporters
cals03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
cals00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NIES3974_41420
03070 Bacterial secretion system
NIES3974_41420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cals02000
]
NIES3974_41420
02044 Secretion system [BR:
cals02044
]
NIES3974_41420
Transporters [BR:
cals02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NIES3974_41420
Secretion system [BR:
cals02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
NIES3974_41420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
cNMP_binding
SMC_N
DUF87
AAA_22
ABC_ATPase
AAA_21
AAA_29
AAA_16
nSTAND3
AAA_23
RsgA_GTPase
MMR_HSR1
DUF3987
AAA_30
nSTAND1
NB-ARC
Zeta_toxin
MobB
Motif
Other DBs
NCBI-ProteinID:
BAZ07479
UniProt:
A0A1Z4NP29
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All DBs
Position
5066604..5069630
Genome browser
AA seq
1008 aa
AA seq
DB search
MTYLKNNLQTFIASLPGFEQIPGEVLTRLLTTIQAGRFRIGQKIIGQETIPDRVGIIYTG
KVRLIGYDPRTQMPTTLKLLETGDFLGEISLLRQTPCETAIASTEVTILTIAAADFLSLM
ASFPAFAQARQSQVHMAEVFEVVGLQLDALANGGANLREITEKAATNATIINLPPGKLGV
EELEREKLWFVSGGVVNQNPRGSRLDLNKLGMIEVTGKNSARLLGLDPEDVSCLQGYVDT
NTQSPLPSQEILTSSPSPEEELEIPYVEETEPLFSSSPQQYKPDNQRVKYPFVRGRGEVN
GTAACWQMLCQYLHIPFRRDVVKRVLTEQFRRQESISFQVCAYLGELIGFKSQLVDLLTQ
NVTRIPTPALMRYQGEYAVIYEASDRVMVLGVPSQGIKRFSPGKLIAELEAVRENSSPQL
QVLLLSATQETPQQRFGLSWFLPYISRYRRVLIEVFLASFFVQLAALVNPLVIQLIIDKV
IVQNSISTLNVLGALLLVVGFFEAILGALRTYLFVDTTNRMDMGLGSQIIDHLLRLPLRY
FERRPVGELATRINELENIRQFLTGTALTVGLDAVFSVVYIIVMLFYSWQLTLVGLATIP
VFLLITFIASPIIRKQLRHKAERNAETQSYLVEVMSGIQTVKAQNIELRSRFTWQEKYAR
YVAAGFDNVITSTWASATSNFLNKLSSLLVLWAGAYLVLQGELTLGELIAFRIISSYVTS
PILRLAQLWQSFQETALSLERLSDIVDTPEEGEQDRGNIPLPAIQGAVKFENISFRFAST
GPLQLANVNIEIPPGKFVGIVGQSGSGKSTLMKLLLRLYAPESGRILIDDYDIAKVELYS
LRRQLGVVPQDSLLFDGTVQENMALTNPDATSEEIIQAAKIAAAHDFIMNLPNGYNTRVG
EKGAGLSGGQRQRIAIARSVLQKPKLLVLDEATSALDYPTERQVCINLANAFRGNTVFFI
THRLNTVSHADIILVMDGGRLIEQGNHQELMAKKGHYFYLYNQQEVNL
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgacttacctcaaaaataacttgcaaacatttattgcttccctacccggttttgagcaa
ataccaggggaagtattgacgagattattgacaacgattcaagcaggacgcttccgaatc
ggtcagaaaattattggtcaggaaacaattcccgaccgagtaggaataatttataccggg
aaagtacggttaattggctatgacccccgtacccaaatgccaactaccttaaaattacta
gaaacaggggattttttaggggaaattagtttactgcgtcaaacaccctgtgaaaccgcg
atcgcatctacggaagtgacaattttaacgattgctgcggcggattttttgagtttaatg
gcgagttttccagcttttgctcaagcacgtcaaagtcaagtgcatatggcggaagtgttt
gaagttgtggggttacagttggatgctttggctaatggaggagcgaatctacgggaaatt
acggaaaaagctgccacgaatgccacgattatcaatttacctcccggtaaactgggtgtg
gaggaattagaaagggaaaaactttggtttgtcagtggtggtgttgtcaatcagaatccc
cgtggttcccgtttagatttaaataaattggggatgattgaggtgacggggaagaattct
gcacggttgctaggattagatccggaggatgtatcttgtttacagggttacgtagataca
aatacccaatctcccctaccttctcaagaaatcctcaccagttccccatctccggaagag
gaattagaaatcccctacgtcgaggaaacagaacccctattctcttcctcacctcagcag
tacaaaccagataatcaacgagttaagtatccatttgttcggggtcggggggaagtgaat
gggacagcagcttgttggcagatgttatgtcagtatttacacattcccttccgtcgagat
gtggtgaaacgggtattaacagagcagtttcgccgacaggaatctatttcttttcaagtt
tgtgcctatttaggtgaattaatcgggtttaaatcccaattagtagatttacttacccaa
aatgtcacacgtatccccacacccgcattgatgcgttaccaaggggaatatgcagttatt
tatgaagctagcgatcgcgtgatggttttaggtgtaccgtcccagggaataaagcggttt
tcaccgggtaagttgattgcagagttagaagcggtaagggagaattcgagtccccagttg
caagttttgttgttgagtgcgacccaggaaacaccccaacagcgttttggtttaagttgg
tttttaccctatatatcccgttatcgtcgggtattgattgaagtctttttggcttcattt
tttgtgcaattagcggctttagtgaatccgttggtgattcagttaattattgataaggtt
attgtccaaaatagtattagtaccctgaatgtattgggggctttattattagtggttggt
ttttttgaggcgattttaggcgctctccgcacctatctatttgtggatacaactaaccgc
atggatatggggttaggttcacaaattattgaccatctattacgtttaccactacgctat
tttgaacgacgacctgtaggagaattagctactagaattaacgaattagaaaatattcgt
caatttctcacgggaacagccttgacagtaggattagatgcggtattttccgtagtatat
attattgtcatgctcttttatagctggcaattaactttagttggtttagcgacaattccc
gtattcctattaattacctttattgcatcccccattattcgtaaacaactacgccacaaa
gccgaacgcaacgccgaaacccaatcctatctagtagaggtaatgtcgggaattcaaacc
gtcaaagcccaaaatatcgaattgcgatcgcgttttacatggcaagaaaaatatgctcgc
tatgtcgctgcgggttttgataatgtgattacttccacttgggctagtgctactagtaat
tttctgaataaattaagcagtttgctagtgttatgggcgggagcttatttagttttacaa
ggggaattaaccctaggagaattaatcgcctttcggattatttccagctacgtcaccagt
cctatattacgattagctcaactgtggcagagtttccaagaaacagctttatctttagaa
cgattaagtgatattgtcgataccccagaagaaggagagcaagaccgaggaaatattcct
ctcccagcaattcaaggagcagttaaatttgaaaatatatccttccgctttgcaagcaca
ggtcctctacaattagccaacgtcaacattgaaattcccccaggaaaatttgtgggaatc
gttggacaaagtggttccggaaaaagcaccttaatgaaactattattaagattatacgca
cccgaatccggacgcattttaatcgatgattatgatattgccaaagtcgaactttattcc
ctacgacgacaattaggagtagtcccccaagatagtttactattcgacggcactgtccag
gaaaatatggcccttaccaaccccgacgcaaccagcgaagaaatcatccaagcagctaaa
atcgcagcagctcacgactttatcatgaacctacctaatggctataatacccgcgtcgga
gaaaaaggagcaggactatccggaggacaaagacaacggattgcgatcgcgcgttcagtc
ttgcaaaaaccgaaattactcgttttagatgaagctaccagtgctttagattacccaacg
gaacggcaggtttgtatcaatttagccaatgcgtttcggggaaatacagtattttttatt
acccatagattaaatacagttagtcatgcagacatcattttagtcatggatggaggaaga
ttaatagaacaaggaaatcaccaggaattaatggcgaaaaaaggtcattatttttatctt
tataatcagcaggaagtgaatttgtaa
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