Calothrix sp. NIES-3974: NIES3974_43350
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Entry
NIES3974_43350 CDS
T09641
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cals
Calothrix sp. NIES-3974
Brite
KEGG Orthology (KO) [BR:
cals00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cals03032
]
NIES3974_43350
03400 DNA repair and recombination proteins [BR:
cals03400
]
NIES3974_43350
Enzymes [BR:
cals01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NIES3974_43350
DNA replication proteins [BR:
cals03032
]
Prokaryotic type
DNA Topoisomerases
NIES3974_43350
DNA repair and recombination proteins [BR:
cals03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NIES3974_43350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_4
DUF908
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
BAZ07670
UniProt:
A0A1Z4NPQ9
LinkDB
All DBs
Position
complement(5327533..5329713)
Genome browser
AA seq
726 aa
AA seq
DB search
MKRLLVVESPGKVKKLSQILGHDWIVKASCGHIRELSNQGEDALGFTMTENRVTCDYIPR
DQRARETIQQLKAAARQVQEVILATDPDREGETIAWHLQQALGLKNPRRVVYTEITDAAV
KQAIAHPRNLDFNLIGAGLCRDCLDKLVGYKGSPLVWKLNNGAKSVGRVQSATLHLICQR
EREIIAFVPQDYWSVWVDYGEGLRAFYHGDVNAPRDNSPPTENHDDTVTKPQTTPESTRV
LSEAEANRLVEIAKSHPHQVIQYTGKLENRQPPPPFITSTLQQAAGSRLKFAPEHTMQVA
QKLFEAGLITYMRTDSVILSPEFCDRVRQWLETNDPENIPPQKTRHRSRKNAQEAHEAIR
PTDLFRPSTQLRSELSEEEFNLYVLIWKRAVASQCRPAILRKTQVISQSGDILWQARGQV
VEFLGYARYWANLSQDTLLPLLHQGQELTLTNAGHEKKQTQPPPRYSEPKLVQLMERKGI
GRPSTYSPTIATLKKRGYVQLTKANLQPTSLGMEVDDFLQKALPDLLESEFTAKMEAALD
DIASGKQPWQDYLINWHQTYFAIALAKAQTIAANFTTSNPKTPTPSPNSSNYQKSRTRCP
VCHHQLAKIPSKKLKKKYFLKCVSGCDNIVMFWNEHAKTWQQPSSSSPTATKSPSTPVPT
KYPCPVCQKPLEEYFYQKDGQQKSLLRCSQPQSRNDKNHKDVAYFQTQKGWWSPKYGELS
VIDEGK
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgactgctggtagttgaatctcctggaaaggtgaaaaaactgagtcaaatcctg
ggtcatgattggattgtcaaggctagttgcggtcatattcgggaattaagtaatcagggg
gaggatgcactcggctttaccatgacggaaaaccgggtaacgtgtgattatataccccgt
gaccaaagagccagggaaacgattcaacaattaaaagcagccgcacgtcaggtacaggaa
gtaattttagcgacagaccctgaccgggaaggggaaactattgcttggcatttgcaacag
gctttgggattgaaaaatccccgtcgggtagtatatacagaaattaccgatgcagcagtc
aaacaggcgatcgctcacccccgcaatttggactttaatttgattggtgcaggtttgtgt
cgggattgtttggataagttggtaggttataagggtagtcccctggtttggaagttgaat
aatggtgcaaaaagtgtcggtcgggtacaaagtgcgactttacatttgatttgtcaacgg
gaacgggaaattattgcctttgtcccccaggattattggagtgtttgggtggactatgga
gagggtttacgagctttttatcatggtgatgtgaatgcacctagggataattctccccct
acggaaaatcatgatgatacggtgacaaaaccccagaccacaccggaatcaacccgggta
ctatcggaagcggaagccaatcgcttagtcgaaattgccaaatcccacccccatcaagtc
attcaatacaccggaaaattagaaaaccgtcaaccacctcccccttttattacttccacc
ctgcaacaagctgcgggttcgcggttaaaatttgctcccgaacacacgatgcaggtagca
caaaagctgtttgaagcgggtttaattacctacatgcgcaccgattcggtcatcctcagt
cccgaattctgcgatcgcgttcgtcaatggttagagaccaacgacccagaaaatatccct
ccccaaaaaacccgacaccgcagtcgtaaaaatgctcaagaagctcacgaagctatccgt
cccaccgacctattccgtccctccactcagttacgcagcgaacttagtgaagaggaattt
aatttatatgtactaatttggaagcgagcagttgcatcccaatgtcgtccagccatactc
cgtaaaacccaggtaattagtcaatcgggggacattctttggcaagcacggggacaggtg
gtagaatttttaggttacgctcgctactgggcaaatttaagtcaagataccctcctaccc
cttctccaccagggacaggaattaaccttaaccaatgcaggacacgaaaaaaagcaaacc
caacccccaccccgctacagcgaacccaaattagtccagttaatggaacgcaaagggatt
ggtcgtccaagcacctattccccaaccattgccaccttgaaaaaacgcggttatgtccaa
ctcaccaaagccaacctgcaaccaacatccttggggatggaagtggacgattttttgcaa
aaagccttaccagacctcctagaaagcgaattcaccgccaaaatggaagcggctctagac
gacattgcctccggtaaacagccctggcaagattatctcatcaattggcaccaaacctac
tttgcgatcgccctagctaaagcccaaaccattgctgccaactttaccaccagtaacccc
aaaactccaaccccatcccctaactcctccaactaccaaaaatcccgtacccgttgtcca
gtttgccatcaccagttagccaaaatccccagcaaaaagctgaaaaagaaatattttctt
aaatgtgtcagtggttgcgacaatatcgtcatgttttggaacgaacatgcaaaaacttgg
caacaaccctcatctagttcccccacagcaactaaatccccgtccaccccagtccccacc
aaatatccctgtccagtctgtcaaaagcctttagaagaatatttttatcaaaaagacgga
caacaaaaatccctgttacgctgtagccaaccccaatcgagaaacgacaaaaaccacaaa
gatgtcgcctattttcaaacacaaaaaggttggtggagtcctaaatatggagaattatcg
gtaatcgatgaaggtaagtag
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